Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01139 ATGATCCAGAACGCTGATATGAAACTCGAGTCAGGGACTTGTAACGTTTGCTCAGCTCCTTGTTCGTCCTGCATTCATCTTAGTCGAGCTCTCACTCGACCAAAGGCCAAAGAGTTCTCTGATGAAAATTGTCACTTGGGGGAGGCCAATCAGTTTTCTACGGATGAGGGTGATCAATCTTCTCGTAGGAGCAGAACTTGTGAAAGATTGAATCATGCTAGCAGTGGAACCGGTAACATGCTTAGTGTTAATTCCAGTCATGAATCTCTGTCTGAAAATGCTGAAAGCACACGAGTTTTATCAGAGAAGTACCGGGATGCCAAATTTTTAGAAGGTCTTGATGACAATGCTTCTTGTATCAGTAGAACCAGTGATGCTGATTTAATACCTGTTATTAATGGCAATACTGCTGTGCTTTCGACAAGAGTATATCCAAAGTCAGAATCAGATTCAGATAGTGATGTTGGTAATGTGAAAGACAAAAATCATAAAGTTCCAGTCCGTGATGGACTGCATGAGAAGCAAGGGGAGCAGGTTAAATCACCAGTCAAGCCTGAAGCTCACTCTGAAGATGAGAGTGATGACTCAGATGTTGAGCATGATGTAAAAGTTTGTGACATCTGTGGGGATGCTGGTCGGGAGGAGCTGCTTGCAGTATGTAGCAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTTGAAAAGGTTCCAGAAGGAGACTGGTTATGTGAAGAATGCAAGTATGCTCAGGAGACTGAAAATCAAAAGCTGGGTAAAATTAATTCAACTGCACTTATCTCTGGAAAAAGGCCTCTTGAAAGTGAAGAATTGGCTAAGGCAGCAAAAAAGCAAGATCTTGAGTCAAACATTGGGTCACCAAAGGGTTCAAGCCCCAAGAGAGTATTTCCACTGTCACGAGAGTCTTCATTCAAGAACCTTGATAAGGGAAAGTTGAAGTCTGGTTACCACAGCTCCATTTGTAATCACCCTGATGGCAGTGACAGAGAACTTGCTCGCTCTCTTTCAGCTGGTCCTCGAAGTCAAACAACAAAGAGTACATTGTTGAAGTCAAATTCATTCAATACGAATTCCAACCCAAGAGTCAAACTTGTTGATGAAGTCCCGCAAAAGAAGAAAGGGGGCAGCGAACATGCTTCTAAGGATAGCGAGGCACCAAGGCAAATAATTAGCAAATCTACATCATTCAAATCATCAAATTTGAGCAGTTCGAATGCCACTGAATCAAAAGTTAAAATGCTTACTTCTAAGTCTGGAACAACACAGGACCTGAAAGGATCAAGACTAACAAAAGAATCTGACAGGAAATTTCTCTCTAGGGTTGATCAGCCTGTGGTTTGTTCAACCATTTCCAAACCTATAGGTGACCATAAGCTTTCTCCTCATGGTGAGACCAGTAAACCTTCTGCAGTTAACAATCGAGAGCGTAAGGTCAACCCAGATGTGAGATCAAATTCATTATCTAAGTCTAAGAATAATATAAACCGCAAGAGTTCGGCACCTTTATTTAGTGCAGAAAGAATAGCAACCAGTGGTGAAGAAACTCAATTGGATGGGGCGCCTCAATCAATAGAATTTTCAAATCAAATTGATAATGCCAAAGATAGTTCTATTGATCATGTGAGCTCTGGTCTTACTAATGCTTCTGGAAGCTCAGTCTTTCACAAAAGTAAGGATTTTGGCCATGCAACAGAATGTCGTGGGGTTGCTAATAGAGAAGAATTCAGCCTCGAAGGATCAACCACTGCCCCAAACAGTTCAAAAGACAAGATACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATATGCAAGAAGAAAGAAGTACCTGATCGAACTGATGAATTTTCTACATCAGGCAGAGACTTGAATTCCGAAGTCAGTTCTCAGGATCAGTCGATTGTTATCAACACACAAAAGAATATTCTTTCTACTGAAGAAACAAAAGCGAGGCAGGAGATCCTTCACAACCCAACATTTGAAACTCCATCTTCCAATGGTTCGAAGCCAGTTAGCTTTGGTCCAATACAGCCAAGAAAGTTAGAATCTGTTGGTCCTGATCCTGGAAATCCTGTAGTGAGAGATTTCCAGAATCAAGCTTTGGCTGTCTCAAGTGTTCTTTCACAGATAGCAGTCTTTCCAGAACATCAATTCATCTGGCAAGGTGTCTTTCAAGTGCACAGATATGGAAAGCTACCTAACTTGTATACTGGAATTCAAGCACATTTATCCACATGTGCATCCCCCAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAAGTTTCCCTCGATGAAGTTTCTCGCTTGAGCACTTGGCCTTCACAATTTCATCAAGGCGGGGCTAGGGAAGATAATATCGCTCTTTACTTTTTTGCCGAAGACATTGAAAGTTATAGGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAAGTTTTGATGGTGTTGAACTTCTCATATTCCCATCTAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGCTGTTTTTCTTATGGGGTGTATTTAGAGGACATAGGATGAATAATTTTGACTCTGCAAGAAAGGTTTGTATTCCCAGTTTGAACGCGGTGCCAGTTGAGAAGGATTTTCCAACTTCTGTCATGAATTTGTCTGAAACCCACAGCTCACTGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAGAACATGCAGTGCAGTTCTCCCTTCCACTTCCATAGGTGAAGGCCCTAATGTTTTCCATGGGGATTTTGATATCAAAGAAACTAGTGATGAGGCATGTTTGGCTTCACAAGTAAACTTACATAGGCAAGATAGTAGAATCAACACTAAATCTACATTGGAGATTCCTTCAAGCAGTGGTCAGTTGTGCCAAGAATTGCATTCCGCAGGTTCATCCCCGAAAGATGGACAGCAGAGAGTCCCCACACCTCCTGAAGCAATGAGAACACTTGTAAGTAACTGGATTGTGGAAACAAATAGTGACTATGATATTTCAGTCAAGCAAGAGAACTCTCTGTCTTCAGGGATTCCTTCTGCCGAGAAACAAGAGACAGATGCTGCAAGCAATACCTCTGAAAATCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACATAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAGCATAGAGGCAACGCTTCAAGAAGACCCATCTATAACAATCATAAACTGTCAGCAAACTAATGATAAAAAAGTTCAGCATATAGATGTTTCAAATGCAGTTTTGAAGGCTTCCACAGATAGTTATCAGAAATTGCCTTGGGATAAGGTGAATGGGAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTAACTGATATTTATGGAAGTTGTAGTTCAGGAGGTAGGGAATCTTCCAATGGCAGTTTTACGGCCCGTGCAAACCATCCTGGTACCTTCTCTTCAGTTGAGGACCTTGGAACCATGGAAAGAACCTTCTTTCCTGTTGATTCGCATAAGAAAAATGACTCGCAATTGATGCTCAACGGCATGCCACTGGAGGGGTCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGCAAAATAAAACCACAGCCACTGCCAGTTCCAGCGCCGCCCCATAAGGGTAT 3752 0.4174 MIQNADMKLESGTCNVCSAPCSSCIHLSRALTRPKAKEFSDENCHLGEANQFSTDEGDQSSRRSRTCERLNHASSGTGNMLSVNSSHESLSENAESTRVLSEKYRDAKFLEGLDDNASCISRTSDADLIPVINGNTAVLSTRVYPKSESDSDSDVGNVKDKNHKVPVRDGLHEKQGEQVKSPVKPEAHSEDESDDSDVEHDVKVCDICGDAGREELLAVCSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAQETENQKLGKINSTALISGKRPLESEELAKAAKKQDLESNIGSPKGSSPKRVFPLSRESSFKNLDKGKLKSGYHSSICNHPDGSDRELARSLSAGPRSQTTKSTLLKSNSFNTNSNPRVKLVDEVPQKKKGGSEHASKDSEAPRQIISKSTSFKSSNLSSSNATESKVKMLTSKSGTTQDLKGSRLTKESDRKFLSRVDQPVVCSTISKPIGDHKLSPHGETSKPSAVNNRERKVNPDVRSNSLSKSKNNINRKSSAPLFSAERIATSGEETQLDGAPQSIEFSNQIDNAKDSSIDHVSSGLTNASGSSVFHKSKDFGHATECRGVANREEFSLEGSTTAPNSSKDKIHKDNRLKAAIQAALLRRPEICKKKEVPDRTDEFSTSGRDLNSEVSSQDQSIVINTQKNILSTEETKARQEILHNPTFETPSSNGSKPVSFGPIQPRKLESVGPDPGNPVVRDFQNQALAVSSVLSQIAVFPEHQFIWQGVFQVHRYGKLPNLYTGIQAHLSTCASPKVLEVVNKFLPEVSLDEVSRLSTWPSQFHQGGAREDNIALYFFAEDIESYRRHYKGLLDHMIRNDLALKGSFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGHRMNNFDSARKVCIPSLNAVPVEKDFPTSVMNLSETHSSLKRMDEQSIACGRTCSAVLPSTSIGEGPNVFHGDFDIKETSDEACLASQVNLHRQDSRINTKSTLEIPSSSGQLCQELHSAGSSPKDGQQRVPTPPEAMRTLVSNWIVETNSDYDISVKQENSLSSGIPSAEKQETDAASNTSENQISERINHDEDQHRPKRKLIEEDLNISIEATLQEDPSITIINCQQTNDKKVQHIDVSNAVLKASTDSYQKLPWDKVNGKLEDGESSSKKLKSGLTDIYGSCSSGGRESSNGSFTARANHPGTFSSVEDLGTMERTFFPVDSHKKNDSQLMLNGMPLEGSCEYEGQFQVGIPNLELALGGKIKPQPLPVPAPPHKGMFPFLVGAVDKKNNQKKPPEVVGDEQEGDNSVAASLSLSLSFPS 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01139 1294 MobiDBLite consensus disorder prediction 974 1000 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 70 94 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 974 1005 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 147 191 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 493 510 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 1280 1294 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 1031 1057 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 284 511 - -
Arst3g01139 1294 PANTHER - 202 905 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 1031 1069 - -
Arst3g01139 1294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 272 IPR013083 -
Arst3g01139 1294 SMART PHD_3 204 251 IPR001965 -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 375 395 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 346 373 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 396 436 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 143 198 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 467 492 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 627 649 - -
Arst3g01139 1294 MobiDBLite consensus disorder prediction 1259 1294 - -
Arst3g01139 1294 ProSiteProfiles Zinc finger PHD-type profile. 202 253 IPR019787 -
Arst3g01139 1294 SUPERFAMILY FYVE/PHD zinc finger 190 257 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01139 Arst-Chr3 8819197 8825888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01139 201 261 C2H2 Transcription Factor Family AT3G01460 32.787 5.65e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01139 - - ahf:112789342 2503.4