Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01138 ATGATCCAGAACGCTGATATGGAACTTGAATCAGGGACTTGTAATATTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTCTAACTGGAACAAAGGCTGAAGAATGCTCTGATGAAAATTGTCGATCAGGGGAACCCAGTCAGTTTTCTATGGATGTGAGTGATCTATCTTCTCATAGGAGTACAGCTTGTGAAAGATTGAAGCATGCTGTCAGTGAAACCAGTAACTTGCTTAGTGTTAATTCTGGTCATGAATCTCTGTCTGAAAATGCTGAAACCACACAAACTTTATCAGAGAAGTATCACGATGCCAAGTGTTTAGAAGGACCTGATGACAGCTCTTCGTGTATCAGTAGAAACAGTAATGCTAATTTAGTTAGTGATAGCCATCAAAGACATGCAGACAAAATAAATATTTCTTGTAGTTCATCCTCAGTTAGTCACTTAGGAGTAGAAGGATCTACAAGTGGGCCATCTGTTTATATATCAGGCTTGTGTGAGATACCCTCTTCTAAAGATGCAGATATGCCAGAGAATTCATCAGAATGCTGTGTTGGAAATGTTGAGTCATCGCCAACCAAGGAGATAATCACTGCTAATTTTTCAGGTGAAAAATTTCTTGCAAATAACAAAGGGCTTGTTAATGGCACTACTAGCAAGTTTTCGGCAAAAGTATATCCAAAGTCAGAAGCAGATAGTGACAATGGTGTTGGTGATGTGAAAGACGAAGATCGTAAAGTTCCAGCCCATGATGGACTGCACGAGAAGCAGGGGGAGCTTGTTAAATCACCCGTCAAGCCCGAAGCTCAATCTGGAGATGTGAGCGATGACTCAGATGTTGAGCATGATGTAAAGGTATGTGACATCTGTGGAGATGCTGGTCGCGAGGAGCTACTTGCAATATGTAGTAGATGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTCGAAAAGGTCCCAGAAGGTGACTGGTTATGTGAAGAATGCAAGTATGCTGAGGAGACTGAAAAACATCGGCTGGATGTTGAAGAGAAAAAGGTCCATAAAGTTTGTTCAACTGCGCAAATATCTGGTAAAAGGCCTTCCGAGGGTGAAGAATTGGCAAAGGCAGGGAAAAGGCAAGCTCTTGAATCAAGTAAAGGGTCACCAAAGGGGTCAAGCCCCAAGAAAATATTTCCACTGTCGCGAGAGTCTTCGTTCAAGAGCATTGATAAAGGAAAGTTGAAGTCTGATCATCAGACCTCCATTTGTAACCACTCCAATGGCAATGACATAGAACTTGCTCGTTCTCTATCTGCTGGTCCTCGGAGTCAAACAGCTAAGAGTACATTGTTAAAGTCAAATTCATTCAACAACATCAATTCCAAGCCCAGAGTCAAACTTGTTGATGAAGTCCCGCAAAAGAAGAAAGGGGCTGGTGAACATACCTCTAAGAATATTGAAATGCCGGGACGAATGATAAGCAAATCTAGTTCATTGAAATCCTCAAATTTGGGCCATTCATGTGCCACTGAATCAAAAGTCAAAATGGTTACTTCCAAACCTGGAACTACTGCAGATCAAAAAGGATCAAAACTAGCAAAAGAATCAGGTGCCTCTGATAGGAAATTTTTCTCTAGGGTTGATCGGCCTGTTGTTTGTTCAACCATGGCTAGTTCTGCTCTTCTGACATCTAAGAGTGATCAGAAGCTTACCCCTCGTAGCGAAACTGCTAAACCTTCAACAATTAACAACAATCACGAATTTAAGGTCAACCAAGATGGGAGATCAAATTCATTATTGAAGTCTAAGAATAATACAAGCCAGAGAACATCAACCAGTGGTGATGAAACTCAATTAGATGGGCTGCCTCAATCAAGAGAGATAACAAATCAGGTTGATAAAACCAAAGGTAGTTCTGGTGATTGTGTGAGGTCTGGTCTTACTAATGCTTCTGAAAGCCCATTCTGTCACAAATGTAAGGATTTAGGCCATGCTACAGAATGTTGCATGGTTGATAAACAGGAATTTGGCCTGGAAGGATCAGCCACTGGCCCAAACAGTTCAAAAGACAAAACACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTACTTAGAAGGCCCAAAATATGCAAGAGGAAAGAAGTGCCTGACCAAACTGAGAAGTTTCTTACATCAGCCATAGACATGAAGTCCGAAGTCACTTCTCAAGATAAGGCGTTTGTTATTGACACTCCAAAGAATATTGTTTCTACTGAAGAAACAAAAGTGAGGCAGGATATCCTTCAGAATCCTACATTTGAAACTTCGTCTTCCAATGATTCGAAGCAACATAGCTTTTGTCCAGCTGATTTTGGATCACAACCTAGAAAGTTAGAATCTGTTGGTCCTACTCCTGGAAATCCTGTAGTTAGAGACTTTCGCAATCAAGCTTTGGCTGTCTCAAGTGTTCTTCCAAAGATATCAGTCTTTCCAGAATATGAATACATTTGGCAAGGTGTCTTTCGAATGCATAGAAGCGGAAAGCCGCCTGACTTATGTACTGGTATTCAAGCGCATTTATCCACATATGCTTCCCCTAAGGTTCTTGAGGTAGTGAACAAGATTCTTCCTGAGGTTTCCCTCAATGAAGTTTCTCGCTTGAGCACGTGGCCTACACAATTTCATCAAGGCGGGGCAAAGGAAGATAATATTGCACTTTACTTTTTTGCTAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCGCTTAAAGGAATTTTTGATGGTGTTGAACTTCTTATATTCCCCTCCAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGTTGTTTTACTTATGGGGTGTATTTAGAGGGCAGAGGAGGAATAATTCTGATTCTGCAAAAAAGATTTGTAGTCCCAGTTTGAATGCGTTGCCAGTTCAGAAGGGTTCTCTGACTGCTGTGATGACTTTGTCTGAAACCCACTGTTCACCAATGCGGATGGATGAACAACCAATTGCTTGTGGTAAAACCTGCAGTGAAGTTCTCTCATCCACTTCCATGGACCAAGGCGATACTATTTTAAGTGGGGATTTTGATATTAAAGAAACTATTTTTGACCAGGCACGTTTGGGTCCACAAGTAAACTTACGGAGGCAAGATAGTAGAATCAACGCGGAATCTGCATCAAAGAATCCGACAAGCAGTGAACAATTGTGCCAACAAATGCACTCTCCAGGTTCACCTCCGATGGACAGCACAGAATCCCCACACCTCCTGAAGCAATGGGAACGCATGTGA 3324 0.4158 MIQNADMELESGTCNICSAPCSSCMHLNRALTGTKAEECSDENCRSGEPSQFSMDVSDLSSHRSTACERLKHAVSETSNLLSVNSGHESLSENAETTQTLSEKYHDAKCLEGPDDSSSCISRNSNANLVSDSHQRHADKINISCSSSSVSHLGVEGSTSGPSVYISGLCEIPSSKDADMPENSSECCVGNVESSPTKEIITANFSGEKFLANNKGLVNGTTSKFSAKVYPKSEADSDNGVGDVKDEDRKVPAHDGLHEKQGELVKSPVKPEAQSGDVSDDSDVEHDVKVCDICGDAGREELLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAEETEKHRLDVEEKKVHKVCSTAQISGKRPSEGEELAKAGKRQALESSKGSPKGSSPKKIFPLSRESSFKSIDKGKLKSDHQTSICNHSNGNDIELARSLSAGPRSQTAKSTLLKSNSFNNINSKPRVKLVDEVPQKKKGAGEHTSKNIEMPGRMISKSSSLKSSNLGHSCATESKVKMVTSKPGTTADQKGSKLAKESGASDRKFFSRVDRPVVCSTMASSALLTSKSDQKLTPRSETAKPSTINNNHEFKVNQDGRSNSLLKSKNNTSQRTSTSGDETQLDGLPQSREITNQVDKTKGSSGDCVRSGLTNASESPFCHKCKDLGHATECCMVDKQEFGLEGSATGPNSSKDKTHKDNRLKAAIQAALLRRPKICKRKEVPDQTEKFLTSAIDMKSEVTSQDKAFVIDTPKNIVSTEETKVRQDILQNPTFETSSSNDSKQHSFCPADFGSQPRKLESVGPTPGNPVVRDFRNQALAVSSVLPKISVFPEYEYIWQGVFRMHRSGKPPDLCTGIQAHLSTYASPKVLEVVNKILPEVSLNEVSRLSTWPTQFHQGGAKEDNIALYFFAKDIESYERHYKGLLDHMIRNDLALKGIFDGVELLIFPSNQLPENSQRWNMLFYLWGVFRGQRRNNSDSAKKICSPSLNALPVQKGSLTAVMTLSETHCSPMRMDEQPIACGKTCSEVLSSTSMDQGDTILSGDFDIKETIFDQARLGPQVNLRRQDSRINAESASKNPTSSEQLCQQMHSPGSPPMDSTESPHLLKQWERM 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01138 1107 MobiDBLite consensus disorder prediction 765 784 - -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 237 265 - -
Arst3g01138 1107 SMART PHD_3 289 336 IPR001965 -
Arst3g01138 1107 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 364 IPR013083 -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 496 530 - -
Arst3g01138 1107 PANTHER - 287 1014 - -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 361 427 - -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 231 281 - -
Arst3g01138 1107 SUPERFAMILY FYVE/PHD zinc finger 276 341 IPR011011 -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 1060 1093 - -
Arst3g01138 1107 ProSiteProfiles Zinc finger PHD-type profile. 287 338 IPR019787 -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 765 799 - -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 563 625 - -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 1060 1107 - -
Arst3g01138 1107 MobiDBLite consensus disorder prediction 496 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01138 Arst-Chr3 8797348 8803798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01138 286 347 C2H2 Transcription Factor Family AT3G01460 32.258 8.40e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01138 - - adu:107477384 2181.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01138 3 8797348 8803798 Arst5g01569 5 17870739 17879469 ECH
Arst3g01138 3 8797348 8803798 Arst3g01138 3 8797348 8803798 ECH