Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01135 ATGACAATAACTTCTCAAGTTATTACATGCAAAGCTGCAGTATGTTGGAAGGTTGGAGAGGGTGTGAAGATTGAAGAGATTCAAGTTGATCCACCAAAATCAACTGAAGTTCGACTTAAGATGCTTTGTTCTAGCATCTGCCACACTGATATCTCAAGCATTCAAGGAACTCCTATGTTTAATTTTTATCCTCTAGCACTTGGACACGAAGGAGTTGGGGTTGTAGAAAGTGTTGGGGATGAAGTAAAGAGTTTGAAAGGAGGTGATATGGTGATTCCAATATTTGTAGGAGAGTGCAAAGAATGTGAGAATTGCATTTCAGGAAAATCAAATTTGTGCATGACATATCCTCTGAGCCTAACTGGCTTGATGCCAGATAACACTTCAAGGATGTCCGGCAGAGGCCAGAGGCTATATCATCCTTTTAGTTGCGCCACGTGGTCCGAGTACACGGTTATCGATGTTAACTACCTTGTCAAGGTTGATCCAAGCATTAATCCAGCTCATGGCAGCTTCATCTCATGTGGGTTCTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTTGCTGTCTTTGGTCTTGGTGCTGTTGGATTAGGGGTTATAAGTGCAGCAAAAATGTTGGGGGCAACTAAGATAATAGGGATTGACAAAAATGATATGAAGAGAGAAAAAGGTGAAGCTTTTGGAATGAGTCATTTTATAAATCCAAGTAATTCTGATAAATCTTCTTCAGCATTGGTGAAGGAACTAAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGGCCCTTTGCTTACTGAATCATTAGAAGCTACAAAAATGGGAACAGGTAAAGCAATAACACTTGGTTCAGGAACTGAACCTTATGTACCATTTGATCCGTTTTCTATTCTTTTTGGAAGAATTTTGAAAGGATCAATATTTGGGGGATTAAAATCCATGTCAGACCTACCCATCATAGCTGACAAATGTATTAAACAGGAGTTTCCTCTTCAAGAACTGTTCACCCATGAAGTCAAATTAACAGATATAGAACAAGCATTTGAGTTATTGAAACAACCCAATTGTGTAAAAATTGTCATCGAGATATAA 1128 0.3963 MTITSQVITCKAAVCWKVGEGVKIEEIQVDPPKSTEVRLKMLCSSICHTDISSIQGTPMFNFYPLALGHEGVGVVESVGDEVKSLKGGDMVIPIFVGECKECENCISGKSNLCMTYPLSLTGLMPDNTSRMSGRGQRLYHPFSCATWSEYTVIDVNYLVKVDPSINPAHGSFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGVISAAKMLGATKIIGIDKNDMKREKGEAFGMSHFINPSNSDKSSSALVKELSGGMGVDYSFECTGVGPLLTESLEATKMGTGKAITLGSGTEPYVPFDPFSILFGRILKGSIFGGLKSMSDLPIIADKCIKQEFPLQELFTHEVKLTDIEQAFELLKQPNCVKIVIEI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01135 375 Pfam Zinc-binding dehydrogenase 203 324 IPR013149 -
Arst3g01135 375 CDD liver_alcohol_DH_like 8 373 - -
Arst3g01135 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 336 IPR036291 -
Arst3g01135 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Arst3g01135 375 Gene3D - 180 318 - -
Arst3g01135 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Arst3g01135 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Arst3g01135 375 SUPERFAMILY GroES-like 5 191 IPR011032 -
Arst3g01135 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Arst3g01135 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Arst3g01135 375 Gene3D - 13 370 - -
Arst3g01135 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Arst3g01135 375 SUPERFAMILY GroES-like 325 373 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01135 Arst-Chr3 8776921 8784895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01135 35 375 Monolignol Biosynthesis Gene Families AT2G21730 25.723 2.02e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01135 K00121 - gmx:100798341 565.074