Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01134 ATGGCTACCACTTCACAAGTTATTACCTGCAAAGGAGTAGTGTGCTGGGTTGGTGGAGAGCCTGTAAGATTAGAAGAGATTCAAGTTGATCCACCAAAATCAACTGAAATTCGAGTTAAGATGCTTTGTTCCAGCATCTGCCACACTGATATCAAAAGAATTAGAGGATCCCCAGTAGTGAAGTATCCTCTTGCTGTTGGACATGAAGGAGTCGGTGTTGTAGAGAGTGTTGGAGAGGAAGTAAAAAATCTAAAAGAAGGGGATATGGTGATTCCAACCTTCATAGGAGAGTGCAAACAATGTGAGATTTGCATTTCAGGAAAATCCAATTTGTGCATGACAAACCCTTTAATGCTCAATGGATTGATGAGAGACAACACTTCAAGGTTGTCCTGCAAAGGCAAAAGGCTTCACCATATTTTCAGTTGTGCCACTTGGTCAGAGTACATGGTTGTTGATGCCAACTATGCTCTTAAAGTTGATCCAAGCATTGACCTAGCACATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGTTATGGTGCTGCTTGGAAGGAAGCTAAGGTTGAAAGTGGATCAAGTGTTGCTGTTTTTGGTCTTGGCGCTGTTGGATTGGGGGCCATCAGCGGAGCAAAAATGATGGGAGCAACTAAGATAATAGGGATTGACAAAAATGATATGAAAAGAGAAAAAGGAGAAACTTTTGGGATGACTCGCTTTATAAATCCTAGTGATTCTGATATGCCTGCATCAGAATTGGTGAAAGAATTGAGTGATGGAAGAATGGGTGTGGATTATTCTTTTGAGTGCACTGGAATCAGCCATTTGATTATTGAATCCCTACAAGCCACAAAAGTGGGAACAGGTAAAACAATTGTAATTGGTGCACCAACTGAACCAATCGAGCCATTTGGTTTTGCTTCAATCCTTAAAGGCAAGACTTTGAAAGGTTCTATCTTTGGAGGGTTAAAAGCAAATTCAGACCTTTCCATTATAGCTGACAAATGCCACAAAAGGGAATTTCCTCTTGAAGAGTTATACACTCATGAGGTTCAATTGGCAGATATAAATCAAGCATTTGAGCTTTTGAAACAGCCCAATTGTGTGAAAGTTGTCATCAAGATATGA 1128 0.4043 MATTSQVITCKGVVCWVGGEPVRLEEIQVDPPKSTEIRVKMLCSSICHTDIKRIRGSPVVKYPLAVGHEGVGVVESVGEEVKNLKEGDMVIPTFIGECKQCEICISGKSNLCMTNPLMLNGLMRDNTSRLSCKGKRLHHIFSCATWSEYMVVDANYALKVDPSIDLAHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDKNDMKREKGETFGMTRFINPSDSDMPASELVKELSDGRMGVDYSFECTGISHLIIESLQATKVGTGKTIVIGAPTEPIEPFGFASILKGKTLKGSIFGGLKANSDLSIIADKCHKREFPLEELYTHEVQLADINQAFELLKQPNCVKVVIKI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01134 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Arst3g01134 375 Gene3D - 14 370 - -
Arst3g01134 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 332 IPR036291 -
Arst3g01134 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Arst3g01134 375 SUPERFAMILY GroES-like 3 190 IPR011032 -
Arst3g01134 375 Gene3D - 179 318 - -
Arst3g01134 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Arst3g01134 375 Pfam Zinc-binding dehydrogenase 202 323 IPR013149 -
Arst3g01134 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Arst3g01134 375 CDD liver_alcohol_DH_like 8 374 - -
Arst3g01134 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01134 Arst-Chr3 8757893 8761057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01134 35 367 Monolignol Biosynthesis Gene Families AT2G21730 25.519 5.04e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01134 K00121 - gmx:100798341 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01134 3 8757893 8761057 Arst3g01134 3 8757893 8761057 ECH