Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01133 ATGACAAACACTTCAAAGGTTATTACATGCAAAGGTGCTGTTTGTTGGGGTGCTGGTGAAGCTGTGAGATTAGAAGAGATACAAGTTGATCCACCAAAAGCAAATGAAGTTCGAGTCAAGATGATTTGTGCTAGCATCTGCCACACTGATATCACCTCCATTCAAGGATTATTACCATTTTTTCGTTATCCAATAGCTCTTGGTCACGAAGGAGTTGGGGTTGTGGAATCAGTTGGAGATGGAGTCACAAATCTAAAAGAAGGGGATATGGTGATTCCAACATACATAGGAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGAAAATCAAACTTGTGCTTAACATATCCTATGAGGATCAGTGGCTTGATGCCAGATAACACTTCAAGATTGTCCTGCAAAGGCAACAACTTATATTACTGTTTAACTTTTGCCACGTGGTCCGAGTACACGGTTATCGATGTTAACTACCTCATTAAGGTTGATCCAATCATTAATCCAGCTCATGCCAGCTTCATCTCATGTGGATTCTCAACTGGCTATGGAGCTGCATGGAGAGAAGCCAAAGTTGAAAGTGGATCAAGTGTTGTTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGTTATAAGTGGAGCAAAAACGTTGGGGGCAAAAAAGATAATAGGGATCGACACAAATAACTTGAAGAGAGAAAAGGGAGAAGCATTTGGAATGACTCACTTTATAAATCCAAATGATTCTGATAAATCTCCTTCAACATTGGTGAAAGAATTGAGTGATGGATTTGGTGTGGATTATTCATTTGAGTGCACTGGTGTTGCCCCTTTGCTCACTGAATGCTTAGAAGCCACAAAAATGGGAAGTGGTAAGGCAATATCAATTGGAGCAGGAAATGAAGCTACTGTGCCCCTTGGTCATTTGTCACTTCTTTTTGGCAGAACTTTGAAAGGTTCTATTTTTGGAGGGCTTAAAGCCATTTCAGATCTTTCTATTATAGCTGACAAGTGCCTGAAGCAGGAGTTTCCTCTTGAAGAATTACACAGCCATGAGGTTCAATTGGAAGATGTAAACGAAGCATTTGAGTTGTTGAAACAGCCCAACTGTGTAAAAATTGTCATCAAGATGTGA 1128 0.4034 MTNTSKVITCKGAVCWGAGEAVRLEEIQVDPPKANEVRVKMICASICHTDITSIQGLLPFFRYPIALGHEGVGVVESVGDGVTNLKEGDMVIPTYIGECQECENCISGKSNLCLTYPMRISGLMPDNTSRLSCKGNNLYYCLTFATWSEYTVIDVNYLIKVDPIINPAHASFISCGFSTGYGAAWREAKVESGSSVVVFGLGAVGLGVISGAKTLGAKKIIGIDTNNLKREKGEAFGMTHFINPNDSDKSPSTLVKELSDGFGVDYSFECTGVAPLLTECLEATKMGSGKAISIGAGNEATVPLGHLSLLFGRTLKGSIFGGLKAISDLSIIADKCLKQEFPLEELHSHEVQLEDVNEAFELLKQPNCVKIVIKM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01133 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Arst3g01133 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Arst3g01133 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Arst3g01133 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 334 IPR036291 -
Arst3g01133 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Arst3g01133 375 Gene3D - 14 370 - -
Arst3g01133 375 Gene3D - 180 318 - -
Arst3g01133 375 SUPERFAMILY GroES-like 4 191 IPR011032 -
Arst3g01133 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Arst3g01133 375 CDD liver_alcohol_DH_like 8 374 - -
Arst3g01133 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01133 Arst-Chr3 8747846 8750267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01133 35 367 Monolignol Biosynthesis Gene Families AT2G21730 27.193 9.53e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01133 K00121 - gmx:100798341 556.984