Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01121 ATGAGAGACCTTTGCAGAAACTTCCAGCGTGGCAGCTGTCAATACGGAGATAGGTGTAAATTTATACATGCTGTGGCACAACAAGGGAAGCCTAATAATAGTTTTCATGGTTTTGGGGGACAGAATAGTTTTTACCAACAGCAACAGCAACAGCAAAATGTTAACCCTTTTGGATTTGGGTCTAAATCTGCTTCACAACCACACCAACAGCAGCAAAAGACCAATCCTTTTGGCTTTGGGGTGCAGAACAACATCAACAACTCACAATTCAAAGGGACCCCTCAACCTTTTGAAAACAAATGGACTCGGGGTGGCGCTTCGCGGCAATCTGATAACAACCCCCTACCGGCGAATCATGAATGTACAGATCCTGAGGTCTGCAAGCGCCAGATTGCTGAAGATTTCAAGCAAGAGAGGCCACTCTGGATACTTACATGCTATGGTCATTCTAAAGGTGCACCTTGTGACATAGTTGGTGATTTTAGCTATGAAGAACTGAGGGCAGCAGCTTATGAGGATGTGAAGCGAGGGATGAACTTGCAATCAATTGTTGAGAGAGAGAGAAATACACTGAATTCCAAGTTGGCTGAGTTCGAGAAACTACTTTCTGAACCCTACAGAATGCCATTTAATCCTGCTGTTAACAGTCAAAATCATCAGAATGCAAATCCGTTTTCAATGCCTATGCAAAATGATGGCCAGCATAATGCAAATCCATTTTCAATAACTACACAAAACAATGGTCCTGTGTCAGTCTCAAGCTTTAGCCAACTGGGTGCTTCATTGAACACGGGATTTGATAGGCCCTCTGCACAAGCACCGAACACTCCGCCACAGTCTAGTTTCTTCGGAAGTGGAGGAAACACTTTTACACCCAACACTGCAAACATAAGTGGCAGAGGCTTCTCAGGTGCTCCAAGCAGCCCCTTCTCTACCCCAGCGGAGTCAACAATGTTCCCGAGTTCAACTTCTCAGCAGTCATCCTTTGGCTTCAATGACTTGAGCTCCACTCCAATGTTTCAGACTACACCAGATGTTCAATCTTCAAGCATGTCCCAGGGAGAGAATGTTTCAACAGATCTCAGTATTTGGTTAAAAGAGAAATGGAATCCTGGAGAGATTCCCGAAGAAGCTCCTCCAGATTCAGTTGTTCGGTAG 1158 0.4473 MRDLCRNFQRGSCQYGDRCKFIHAVAQQGKPNNSFHGFGGQNSFYQQQQQQQNVNPFGFGSKSASQPHQQQQKTNPFGFGVQNNINNSQFKGTPQQNQFKPFENKWTRGGASRQSDNNPLPANHECTDPEVCKRQIAEDFKQERPLWILTCYGHSKGAPCDIVGDFSYEELRAAAYEDVKRGMNLQSIVERERNTLNSKLAEFEKLLSEPYRMPFNPAVNSQNHQNANPFSMPMQNDGQHNANPFSITTQNNGPVSVSSFSQLGASLNTGFDRPSAQAPNTPPQSSFFGSGGNTFTPNTANISGRGFSGAPSSPFSTPAESTMFPSSTSQQSSFGFNDLSSTPMFQTTPDVQSSSMSQGENVSTDLSIWLKEKWNPGEIPEEAPPDSVVR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01121 390 MobiDBLite consensus disorder prediction 54 126 - -
Arst3g01121 390 MobiDBLite consensus disorder prediction 305 362 - -
Arst3g01121 390 SUPERFAMILY CCCH zinc finger 3 26 IPR036855 GO:0046872
Arst3g01121 390 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 85 388 - -
Arst3g01121 390 MobiDBLite consensus disorder prediction 222 245 - -
Arst3g01121 390 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2 23 IPR000571 GO:0046872
Arst3g01121 390 MobiDBLite consensus disorder prediction 268 292 - -
Arst3g01121 390 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Arst3g01121 390 Coils Coil 189 209 - -
Arst3g01121 390 Gene3D - 1 75 - -
Arst3g01121 390 MobiDBLite consensus disorder prediction 54 122 - -
Arst3g01121 390 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst3g01121 zf-CCCH 1.6e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01121 K14321 - gmx:100814339 459.914