Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01115 ATGGGGAGATCACGAAGTGGTTATGATGAGAGTGGGTTGAAGAAAGGTCCATGGACACCGGAAGAGGATAGAATATTGGTGGATTACATAAACAAAAACGGCCATGGAAGTAATTGGCGAGCGCTTCCTAAGATTGCAGGTTTAAACAGATGTGGAAAGAGTTGCAGGCTGAGGTGGACTAACTACCTCAGGCCTGATATCAAGAGAGGAAAATTCTCTCAAGAAGAAGAGAAACTCATCATCAACTTACATCAACTTCTTGGCAATAAGTGGTCAGCAATAGCAAGTCATCTACCAGGAAGAACTGACAATGAAATCAAGAATTTCTGGAACACTAATCTTAGAAAGAAGCTTCTAAGAATGGGGTTAGATCCAGTGACTCATCGTCCAAGATTAGATCATAATCATAATCATAATCAACTTCAACTTCTTTCCAATCTTCAACACTTGCTTCTTGCTGCAAACATTCTCAACAATAACAACAATAATAATGCTCTATTAAGTACTCTTCTTATTAACTCTGATAATGCCAAACTCCAAATCCTCCAAAATATGCTTCAAATCCTTGCTACTACTACTACTAATAATAATAATCTTGCACCAAACTTGGAGCCACTACTCAATCATCAACAATTTGGTCCATTAACCTCATCATCATCATCATCATCAGTTCCAAATGGTTTTTATGAATCTTTAGGGTTGAATGAATCTATGCTCCAAAACCTTATTTGCAGTAATGATTCTTTCCCTTGTCAAAATCAGCCCAATTTCCAAAACTTTGAAGCTCCTCCTCATGATGATAATGTTAATAATAATAATGAGAAAGTTGTTGTTGATGGCACAAATTCTTCTTCTCCTACAACACCATTGAATTGTTATTCACTTCCAAATCTGGTTTCAGCCTCATCACCTCATCATGCATGTTCCAACAAAGTAAATAATAATAATAATAAT 954 0.3637 MGRSRSGYDESGLKKGPWTPEEDRILVDYINKNGHGSNWRALPKIAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEKLIINLHQLLGNKWSAIASHLPGRTDNEIKNFWNTNLRKKLLRMGLDPVTHRPRLDHNHNHNQLQLLSNLQHLLLAANILNNNNNNNALLSTLLINSDNAKLQILQNMLQILATTTTNNNNLAPNLEPLLNHQQFGPLTSSSSSSSVPNGFYESLGLNESMLQNLICSNDSFPCQNQPNFQNFEAPPHDDNVNNNNEKVVVDGTNSSSPTTPLNCYSLPNLVSASSPHHACSNKVNNNNNN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01115 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Arst3g01115 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Arst3g01115 318 SMART sant 68 116 IPR001005 -
Arst3g01115 318 SMART sant 14 65 IPR001005 -
Arst3g01115 318 MobiDBLite consensus disorder prediction 259 286 - -
Arst3g01115 318 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Arst3g01115 318 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Arst3g01115 318 Gene3D - 8 68 - -
Arst3g01115 318 CDD SANT 17 63 IPR001005 -
Arst3g01115 318 Gene3D - 71 118 - -
Arst3g01115 318 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 246 - -
Arst3g01115 318 CDD SANT 71 114 IPR001005 -
Arst3g01115 318 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Arst3g01115 318 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Arst3g01115 318 FunFam Transcription factor RAX3 8 69 - -
Arst3g01115 318 FunFam Transcription factor MYB39 71 132 - -
Arst3g01115 318 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01115 Arst-Chr3 8598844 8600157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01115 1 259 MYB Transcription Factor Family AT5G16770 54.647 8.92e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g01115 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01115 K09422 - gmx:547488 285.804