Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01097 ATGGAAGGTGAAGCAAGTCTCTCACAAATTGCTCCGCCCACCTTTGATGGAGAAAACTATGACCTTTGGGCAGTTAAAATGGAGTCTTATTTGGAGGCATTGGACCTTTGGGAAGCCGTGGAAGAGGATTACGAAATTCCTCCGCTGCCAAACAATCCTACCATGGCTCAAATAAAATTGCACAAGGAGAAAAAAACAAGGAAGGCAAAGGCAAGATCATGTCTCTTTACTGGTGTTTCATCAATAATCTTCACCAGAATCATGACTCTCAAAACACCAAAAGCAATTTGGGACTATTTAAAGGAAGAATACGCAGGGGATGAGAGGATTCGAGGCATGCAAGTGCTCAACTTGATGAGGGAATTCGAGATGCAGAGAATGAAAGATTCTGAGACAATCAAAGAATACTCTGACAGGTTGCTTTCTATTGCAAACAAAGTTAGATTACTCGGCACTGAATTCACTGATTCTAGAATTGTGGAAAAAATTCTAGTTACAGTGCCAGAGAGATATGAAGCATCAATAACTACTTTGGAGAATACGAAGGATCTGTCCAAAATCACCTTAGCAGGAGTGTTACATGCCTTGCAGGCCCAAGAGCAGCGAAGGCTTATGAGACAAGATCACGTGGTTGAAGGTGCTTTACCAGCCAAGCATCATGAAGTTGGAAGTAGTCAAAGTGACGTCATCATGATCCTACTCCCAAACTCTCCAGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTTGGTGCAGTTTCCACCACTGCCAACCCTTCTTACACCTCCGTTGAAATCACAAAGCAGCTCAAAGCCTCCAAGGCCAAAATCGTCATTACACGTTCCATGCACGTGCACAAGCTCAAACAAGAAGAAGAAAACACCTTTATAGTGATAACTGTAGACAAACCACCAGAGAACTGCATGAGTTACTCGGTGGTTTCCAGCATGGAAGGGAAGCTGCCGGAGGTGGATATCGACCCTGACGACATGGTGGCACTGCCATTTTCCTCCGGCACGACGGGGCTGCCGAAGGGTGTGGTTCTGACACACAGAAGTCTGATAACAAACGTGGCTCAACAAGTTGAGGGAGAGAACCCTAACTTGCACCTGAAGGAAGAGGATGTAGTGCTTTGCGTTCTACCATTGTTTCACATTTACGCACTACACTCGGTGATGTTGTGCTCTATGAGAGTAGGGTGTAGGGTGTTGCTTATGGAGAAGTTTGAGATGAGGGTGATGTTGGAGCTTGTGGAAAAGCACAGGGTTTCGGTTTTGATGGCAGTACCGGCTTTGGTGGCGGCACTTTCAAAGAACCCCGCGGTGGAGGAGTATGACCTTAGGTCCATGCGGATGGTGATGTCGGGAGGTGCCCCACTTGCAGAGGATATTGAGGAGGCTTTTCATAGTAGATTGCCTCAAGCAATCCCTCGACAGGCTTTAGGAATGACAGAATCAGGACCCGTAATATCAATGTCATTAAGTTTTGCAAAGAATCCAATGACAACCAAGTTAAGGTCATGCGGCACTGTTATTAGAAATGCGGAGTTGAAGATCATTGATCTTTTGACTGGCTCTTCTCTCTCTTATAATACTTCGGGTGAGATTTGCATCCGCGGTCAACAGATTATGAAAGGATACTTGAATGATGAGAGGGCCACAGCAGAAGCTATTGATGAAGAGGGTTGGCTTCATACCGGTGATATTGGCTATGTTGATGATGATGATGAGATTTTCATTGTTGATAGACTCAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGGCTCCGGCAGAACTTGAAGGAATTCTCATGAGCCACCCTTCCATTGAAGACGCAGCTGTTGTCCCGCAAAAAGATGATGTAGCGGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAGGATGCTATAAAGGACTTTATAGCTAAACAGGTAGTGTTTTACAAGAGGCTACATAGAATAATTTTCATTGACGCAATCCCAAAATCTTCAATCGGCAAGATATTAAGAAAAGAACTCAAAGCAACCCTATCTAATTAG 2061 0.4444 MEGEASLSQIAPPTFDGENYDLWAVKMESYLEALDLWEAVEEDYEIPPLPNNPTMAQIKLHKEKKTRKAKARSCLFTGVSSIIFTRIMTLKTPKAIWDYLKEEYAGDERIRGMQVLNLMREFEMQRMKDSETIKEYSDRLLSIANKVRLLGTEFTDSRIVEKILVTVPERYEASITTLENTKDLSKITLAGVLHALQAQEQRRLMRQDHVVEGALPAKHHEVGSSQSDVIMILLPNSPEFVFSFWAASMLGAVSTTANPSYTSVEITKQLKASKAKIVITRSMHVHKLKQEEENTFIVITVDKPPENCMSYSVVSSMEGKLPEVDIDPDDMVALPFSSGTTGLPKGVVLTHRSLITNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHSVMLCSMRVGCRVLLMEKFEMRVMLELVEKHRVSVLMAVPALVAALSKNPAVEEYDLRSMRMVMSGGAPLAEDIEEAFHSRLPQAIPRQALGMTESGPVISMSLSFAKNPMTTKLRSCGTVIRNAELKIIDLLTGSSLSYNTSGEICIRGQQIMKGYLNDERATAEAIDEEGWLHTGDIGYVDDDDEIFIVDRLKELIKFKGFQVAPAELEGILMSHPSIEDAAVVPQKDDVAGEVPVAFVVRSSNDPITEDAIKDFIAKQVVFYKRLHRIIFIDAIPKSSIGKILRKELKATLSN 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01097 686 FunFam Long-chain-fatty-acid--CoA ligase FadD 212 585 - -
Arst3g01097 686 Pfam AMP-binding enzyme 222 590 IPR000873 -
Arst3g01097 686 Pfam Domain of unknown function (DUF4219) 15 41 IPR025314 -
Arst3g01097 686 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 204 682 - -
Arst3g01097 686 SUPERFAMILY Acetyl-CoA synthetase-like 221 684 - -
Arst3g01097 686 Pfam AMP-binding enzyme C-terminal domain 599 674 IPR025110 -
Arst3g01097 686 ProSitePatterns Putative AMP-binding domain signature. 334 345 IPR020845 -
Arst3g01097 686 Gene3D - 585 685 IPR045851 -
Arst3g01097 686 Gene3D - 184 584 IPR042099 -
Arst3g01097 686 CDD 4CL 220 680 - -
Arst3g01097 686 FunFam 4-coumarate--CoA ligase 2 586 686 - -
Arst3g01097 686 Pfam gag-polypeptide of LTR copia-type 65 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01097 Arst-Chr3 8395017 8414306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01097 209 616 Monolignol Biosynthesis Gene Families AT3G21240 57.831 4.53e-176 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01097 K01904 - aew:130789938 629.017