Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01094 ATGGCACCATCATTAGTAGCAACTTATTCCATTGATCCAAAAAAAACCAACTTCATCAACCAAAGTTACCAAACTACCCACATCTTCAGATCAAAATTACCAGACATACCCATCAACAATACCATTCCTCTCCACACTTATTCGTTTCAAAAACTTCCCCAAGTCTCCAACCGCCCGTGTCTCATCACGAGCAATGGCAAGGAGTATACCTATGGTGATACCCACCGCGCTTCTAGAAGCTTGGCCATGGGCCTTTTCAACCTTGGAATCCGCAAAGGTGACATCATAATGATCCTACTCCCAAACTCTCCGGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTGGGCGCAGCTTCCACCCTTGCCAATCCTTCTTACACATCTCTTGAAATCACGAAGCAGCTCAAAGCCACCAAGGCCAAAATCATCATCACACATTCCATGCACGTGCACAAGCTCAAACAAGAACAAGAAGAAGGAAACACATTTATAGTGATAACTGTGGACAAGCCACCAGAGAAGTGCATGAGTTTCTCGACGGTTTCCAGAAATGAAGGAAAGCTGCCAGAGGTGGATATTAACCCTGATGACATGGTGACACTGCCATTTTCCTCCGGCACGACGGGGTTATCAAAGGGTGTGGTTCTAACACACCGGAGTCTGGTAACAAACGTGGCTCAGCAGGTGGAGGGAGAGAACCCTAACTTGCACCTCAAGGAAGAGGATGTAGTGCTTTGTGTGCTACCGTTGTTTCACATTTACGCACTACACTGTGTGATGTTATGCTCTATGAGAGTAGGGTGTAGGGTGTTGCTTATGGAGAAGTTTGAGATGAGGACGATGCTGGAACTTGTGGAGAAGCACAGGGTTTCAGTAGTGATGGCAGTGCCGCCGTTGGTGGTGGCACTGTCAAAGAACCCTGCGGTGGAGGAGTATGAGCTTAGCTCCATCAGGATGATGATGTCTGGAGGTGCCTCTCTTGCAAATGACATCGAGGAGGCTTTTCATAGTAGGTTGCCTCAAGCAATCCTTCGACAGGCTTTGGGAATGACAGAATCAGGACCAGTGATATCAATGTCGTTAAGTTTTGCAAAGCATTCAATGACAACTAAATTAGGATCATGCGGTACTGTCATTAGAAATGCAGAGATGAAAATCATTGACCCTCTAACGGGCTCTTCTCTCTCTTATAATACTCCGGGTGAAATTTGTATTCGAGGTGAACAGATTATGAAAGGATATCTGAATAATGAGAAGGCGACAGCAGAAGCAATTGATGAAGAGGGTTGGCTTCATACCGGTGATATTGGGTATGTGGATGATGATGATGAACTTTTCGTTGTTGATAGACTCAAGGAGCTCATCAAATTCAAAGGCTTTCAGGTAGCTCCGGTAGAACTTGAAGTCCTTCTTATGAGCCACCCTTCCATTGAAGATGCAGCTATTGTCCCGCAAAAAGATGATGTAGCTGGTGAAGTACCAGTTGCTTTTGTGGTGAAGTCATCAAATGACCCTATTACTGAAGATGCTGTAAAGGACTTTATAGCTAATCAGGTAGTATTTTACAAGAGGCTACATAGAGTAATTTTCATTGACGCAATCCCAAAATCTTCAATCGGCAAGATATTAAGAAAAGAACTCAAAGCAAAGCTCGCTAGCTACCATTAA 1671 0.4452 MAPSLVATYSIDPKKTNFINQSYQTTHIFRSKLPDIPINNTIPLHTYSFQKLPQVSNRPCLITSNGKEYTYGDTHRASRSLAMGLFNLGIRKGDIIMILLPNSPEFVFSFWAASMLGAASTLANPSYTSLEITKQLKATKAKIIITHSMHVHKLKQEQEEGNTFIVITVDKPPEKCMSFSTVSRNEGKLPEVDINPDDMVTLPFSSGTTGLSKGVVLTHRSLVTNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHCVMLCSMRVGCRVLLMEKFEMRTMLELVEKHRVSVVMAVPPLVVALSKNPAVEEYELSSIRMMMSGGASLANDIEEAFHSRLPQAILRQALGMTESGPVISMSLSFAKHSMTTKLGSCGTVIRNAEMKIIDPLTGSSLSYNTPGEICIRGEQIMKGYLNNEKATAEAIDEEGWLHTGDIGYVDDDDELFVVDRLKELIKFKGFQVAPVELEVLLMSHPSIEDAAIVPQKDDVAGEVPVAFVVKSSNDPITEDAVKDFIANQVVFYKRLHRVIFIDAIPKSSIGKILRKELKAKLASYH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01094 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 550 - -
Arst3g01094 556 Coils Coil 545 556 - -
Arst3g01094 556 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Arst3g01094 556 Gene3D - 19 452 IPR042099 -
Arst3g01094 556 Pfam AMP-binding enzyme 56 458 IPR000873 -
Arst3g01094 556 CDD 4CL 33 548 - -
Arst3g01094 556 FunFam Long-chain-fatty-acid--CoA ligase FadD 30 453 - -
Arst3g01094 556 FunFam 4-coumarate--CoA ligase 2 454 555 - -
Arst3g01094 556 Gene3D - 453 554 IPR045851 -
Arst3g01094 556 SUPERFAMILY Acetyl-CoA synthetase-like 42 554 - -
Arst3g01094 556 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01094 Arst-Chr3 8360834 8366602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01094 25 473 Monolignol Biosynthesis Gene Families AT1G65060 61.674 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01094 K01904 - jre:108988342 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01094 3 8360834 8366602 Arst3g01094 3 8360834 8366602 ECH