Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01093 ATGGCACCATCATTAGTAGCAACTTATTCCGTTGATCCAAAAGAAACCAACTTCATCAACAAAAGTTACCAAACTACCCACATCTTCAAATCAAAATTACCAGACATACCCATCAACAATACCATTCCTCTCCACACTTATTCCTTTCAAAAACTCCCCCAAGTCTCCAACCGCCCCTGTCTCATCACCAGCGATGGTAAGGAGTACACCTATGCTGATGTCCACCGCGCTTCTAGAAGCTTGGCCATGGGCCTTTTCAACCTTGGAATCCGCAAAGGTGACATCATAATGATCCTACTCCCAAACTCTCCGGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTCGGCGCAGCTTCAACCCTTGCCAATCCTTCTTACACATCTCTTGAAATCACGAAGCAGCTCAAAGCCACCAAGGCCAAAATCGTCATCACACATGCCATGCACGTGCACAAGCTCAAACAAGAACAACAAGAAGAAAACACATTCACAGTGATAACTGTGGACAAGCCACCAGAGAAGTGCATGAGTTTCTCGACGGTTTCCAGAAATGAAGGAAAGCTGCCAGAGGTGGATATTAACCCTGATGACATGGTGACACTGCCATTTTCCTCCGGCACGACGGGGTTATCAAAGGGTGTGGTTCTAACACACCGGAGTCTGGTAACAAACGTGGCTCAGCAGGTGGAGGGAGAGAACCCTAACTTGCACCTCAAGGAAGAGGATGTAGTGCTTTGTGTGCTACCGTTGTTTCACATTTACGCACTACACTGTGTGATGTTATGCTCTATGAGAGTAGGGTGTAGGGTGTTGCTTATGGAGAAGTTTGAGATGAGGACGATGCTGGAACTTGTGGAGAAGCACAGGGTTTCAGTAGTGATGGCAGTGCCGCCGTTGGTGGTGGCACTGTCAAAGAACCCTGCGGTGGAGGAGTATGAGCTTAGCTCCATCAGGATGGTGATGTCTGGAGGTGCCTCTCTTGCAAATGACATCGAGGAGGCTTTCCATAGTAGGTTGCCTCAAGCAATCCTTCGACAGGCTTTAGGAATGACAGAATCTGGACCAGTGATATCAATGTCATTAACTTTTGCAAAGTATCCAATGACAACTAAATCAGGATCGTGTGGCAGTGTCATTAGAAATGCAGAAATGAAGATCATTGACCCTCTAACTGGCTCTTCTCTCCCTCGTAATATGTCGGGTGAAATTTGCATCCGAGGTCAACAAATCATGAAAGGATACCTGAATAATGAGAAGGCGACAGCAGAAGCAATTGATAAAGAGGGATGGCTTCATACAGGTGATATTGGGTATGTGGATGATGATGATGAGCTTTTCGTTGTTGATAGACTCAAGGAGCTCATCAAATTCAAAGGCTTTCAGGTTGCTCCGGTAGAACTTGAAGTCCTTCTTATGACCCACCCTTCCATTCAAGATGCAGCTGTTGTCCCGCAAAAAGATGATGTAGCTGGTGAAGTACCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAGGATGCTATAAAGGACTTTATAGCTAAACAGGTAGTATTTTACAAGAGGCTACATAAAGTAATTTTCATTGACGCAATCCCAAAATCTTCAATCGGCAAGATATTAAGAAAAGAACTCAAAGCAAAGCTCGCTAGCTACCATTAG 1671 0.4512 MAPSLVATYSVDPKETNFINKSYQTTHIFKSKLPDIPINNTIPLHTYSFQKLPQVSNRPCLITSDGKEYTYADVHRASRSLAMGLFNLGIRKGDIIMILLPNSPEFVFSFWAASMLGAASTLANPSYTSLEITKQLKATKAKIVITHAMHVHKLKQEQQEENTFTVITVDKPPEKCMSFSTVSRNEGKLPEVDINPDDMVTLPFSSGTTGLSKGVVLTHRSLVTNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHCVMLCSMRVGCRVLLMEKFEMRTMLELVEKHRVSVVMAVPPLVVALSKNPAVEEYELSSIRMVMSGGASLANDIEEAFHSRLPQAILRQALGMTESGPVISMSLTFAKYPMTTKSGSCGSVIRNAEMKIIDPLTGSSLPRNMSGEICIRGQQIMKGYLNNEKATAEAIDKEGWLHTGDIGYVDDDDELFVVDRLKELIKFKGFQVAPVELEVLLMTHPSIQDAAVVPQKDDVAGEVPVAFVVRSSNDPITEDAIKDFIAKQVVFYKRLHKVIFIDAIPKSSIGKILRKELKAKLASYH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01093 556 Gene3D - 453 554 IPR045851 -
Arst3g01093 556 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Arst3g01093 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 550 - -
Arst3g01093 556 CDD 4CL 33 548 - -
Arst3g01093 556 Gene3D - 19 452 IPR042099 -
Arst3g01093 556 SUPERFAMILY Acetyl-CoA synthetase-like 42 554 - -
Arst3g01093 556 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Arst3g01093 556 Pfam AMP-binding enzyme 56 458 IPR000873 -
Arst3g01093 556 FunFam 4-coumarate--CoA ligase 2 454 555 - -
Arst3g01093 556 FunFam Long-chain-fatty-acid--CoA ligase FadD 30 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01093 Arst-Chr3 8344086 8346738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01093 1 520 Monolignol Biosynthesis Gene Families AT1G51680 55.009 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01093 K01904 - gmx:100790396 716.842