Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01042 ATGATGGAGATAGAAGCTGCAACAAGTGGAAGTAGCAATAGTAGTGGCTTTGATAGGGGAAGCTACTTAGCATGGGAAGATCTAAAAGTTTTTCTTCCAAATTTTGGAAAAGGACCAACTAAGAGGTTGCTTAATGGCCTCAATGGTTATGCTGAACCTGGAAGGATCATGGCTATTATGGGACCTTCTGGCTCTGGAAAATCCACACTCCTTGATTCACTTGCAGGTAGGCTCTCAAAAAATGTGGTCATGACAGGAAATGTTATTCTCAATGGGAAGAAGAAAAACCTAGGCTATGGCTTTGTTGCGTACGTAACACAAGAGGATGTGGTGCTGGGAACCCTAACAGTGAAAGAAACGATATCGTATTCGGCAAATCTAAGGCTTCCAACATCAATGTCGAAAGAAGAAATAGAGAACATCGTGGAAGAAACAATCATAGAGATGGGACTGCAAGACTGTGCTGACAGGTTAATCGGAAACTGGCACCTCAGAGGGATAAGCGGCGGGGAGAAGAAGAGGCTCAGCATTGCCCTTGAGATCCTCACAAAGCCAAGCTTGCTGTTTCTTGATGAACCTACCAGCGGCCTCGACAGCGCCTCCGCGTTCTTCGTCGTTCAGACTCTCCGCAATGTCGCTCGTGACGGCCGCACTGTCATCTCCTCCATTCACCAGCCTAGCAGCGAAGTCTTTGCTCTCTTTGATGACCTTTTCTTGCTCTCCGGCGGCGAAACCGTTTATTTTGGAGAAGCTAAAATGGCCGTTCAGTTCTTTGCTGAAGCCGGATTTCCTTGTCCACGTAAAAGGAATCCTTCTGATCACTTCCTAAGATGCATCAATTCTGACTTTGATGTTGTCACGGCTACACTCAAAGGATCTCAAAGAATTCACGATGTTCCAAATTCAGCAGATCCTTTCATGAATATGGCCACAGCACAAATTAAAGCAATGCTGGTTGATAGATATAGGCGTTCAACTTATGCAACAAGAGCAAAGGACAGGATTCAAGAACTATCTACCAATGAAGGGCTTGAAAATGAGAGACAAAAGGGAAGTCAAGCAACTTGGTGGAAGCAACTGAGGACATTGACAAAGAGATCATTTGTGAACATGTGTAGAGATGTTGGATACTACTGGTTGAGGATCATAATCTACATCATAGTTTCAATATGTGTTGGAACTATCTATTTTGATATTGGCTATAGCTATACCTCAATCCTAGCTCGTGGTGCTTGTGGTGCATTTATCTCAGGCTTCATGACATTCATGTCTATTGGAGGCTTCCCATCATTCATTGAAGAAATGAAGGTTTTCTATAGAGAAAGGCTTAATGGATATTATGGAGTTGCAGCATACATTCTAGCCAACTTCCTATCTTCTTTCCCTTTCTTGGTTGCAATTGCTCTTACTACAAGCACCATCACATACAACATGGTGAAATTCAGGCCAGGGATCATTCACTTTGTGTTCTTCACTCTCAACATCTATGGTTGCATCTCTGTCATAGAGAGTCTCATGATGGTTGTAGCTTCTCTTGTTCCAAATTTCCTAATGGGGATCATCACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTATCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTGCATGGGCAATTCAGGGTGCATACAAGAATGACTTGCTTGGACTTGAGTTTGAACCTATGATACCAGGGGACCCAAAATTAACAGGAGAATATGTGATAACACACATGTTGGGAATTGAATTAAACCATTCAAAATGGTGGGACTTAGGAGCACTATTATTGATCCTCATAGTATATAGGCTTTTGTTCTTCACCATACTCAAGTTGAAGGAAAGAGCATCTCCATTGTTTAAAAACCTTTATGCAAAGAGAACCATTCAGCAACTTGAAAAGAGACCTTCATTCAGAAAAATGCCTTCTTTCCCTTCCATGAGGCATCAACCACTCCACTCTTTGTCTTCTCAAGAGGGTCTTAATTCTCCACTTCATTAG 2046 0.4247 MMEIEAATSGSSNSSGFDRGSYLAWEDLKVFLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVILNGKKKNLGYGFVAYVTQEDVVLGTLTVKETISYSANLRLPTSMSKEEIENIVEETIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTKPSLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVQFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNMATAQIKAMLVDRYRRSTYATRAKDRIQELSTNEGLENERQKGSQATWWKQLRTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGIIHFVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGAYKNDLLGLEFEPMIPGDPKLTGEYVITHMLGIELNHSKWWDLGALLLILIVYRLLFFTILKLKERASPLFKNLYAKRTIQQLEKRPSFRKMPSFPSMRHQPLHSLSSQEGLNSPLH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01042 681 FunFam ABC transporter G family member 11 17 261 - -
Arst3g01042 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 650 - -
Arst3g01042 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 650 - -
Arst3g01042 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 267 IPR003439 GO:0005524
Arst3g01042 681 CDD ABCG_EPDR 20 249 - -
Arst3g01042 681 Gene3D - 23 261 IPR027417 -
Arst3g01042 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 256 IPR027417 -
Arst3g01042 681 Pfam ABC-2 type transporter 224 280 IPR043926 GO:0140359
Arst3g01042 681 MobiDBLite consensus disorder prediction 664 681 - -
Arst3g01042 681 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524|GO:0016887
Arst3g01042 681 Pfam ABC-2 type transporter 359 568 IPR013525 GO:0016020|GO:0140359
Arst3g01042 681 Pfam ABC transporter 44 195 IPR003439 GO:0005524
Arst3g01042 681 SMART AAA_5 53 224 IPR003593 GO:0016887
Arst3g01042 681 MobiDBLite consensus disorder prediction 654 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01042 Arst-Chr3 7887208 7893766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01042 39 236 Calmodulin-binding Proteins AT2G36910 31.797 4.85e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01042 K05681 - gmx:100777598 1199.11