Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01013 ATGCAAGAAGAAGGTTCATCTTCTGTAACTTCGTTGTCACTTTCACCTAGCTTGGGATCTCCACGCCCCATGCTCAAGGAACTGAGATCTGAGGAAAGGGGTTTGTGCTTAATCCATTTGCTTCTCACTTGTGGAAATCATGTAGCTGCTGGGAATGTTGAAACTGCAAATGTTTTACTTGGGCAAAGTTCCATGCTTGCCTCTCCAGAGGGCGATACTATGCAACGGATCGCGGCCTATTTTACTGAAGCACTTGCTGATCGGATGCTTAAGGCATGGCCCGGGCTCCATAGGGCCCTCAACTCAACTAGAATAGTCATGGTTTCTGAAGAAGTTCTCACTCGAAAGCTTTTTTATGAAATTTTTCCTTTTATGAAGATAGCATTTGTTCTGACAAATCAAGCTATCATTGAGGCGATGCAAGGCGAAAAAATGATTCATATAATTGATCTTAATGCTGTTGAATCTGCGCAGTGGCTTGCACTCTTCCAAATTCTGAGTGCACGTCCTGAAGGTCCACCTCATTTGAGAATCACTGGTGTTCATCATAAGAAAGAGATTCTAGACCAAATAGCTTATAGACTGGTTGAAGAAGCAGAGAAGTTGGATATTCCATTCCAGTTTAACCCTGTAGTCAGCAAATTAGAGAGCCTAGATTTTGAAAAACTTCGTGTGAAAACTGGAGAGGCACTCGCTATAATTTCCATGCTCCAATTGCATTCACTTTTGGCTTGCGACGACGAAGGGAGAAGAAATCCTCATTTAGCTGGAACCTCAAATGCAATTCCCCGGCAAAGAAGACAGCCTATGTTCCAAAGCTCATCGAGTGAGAAAGATACGGCCAATGAATATGCGCCTAGTCCTGACTCATCCTCATCGTCTCCAGCATCGTTAACTACTTCAAATTCAAAGCATATGGAGAGCTTTCTTAATGCATTATGCGGATTATCACCAAAGGTTATGGTTGTAACTGAACAGGACTCCAATCACAATGGTTTGACTCTTATGGAGAGGCTACTAGAAGCTCTATACTCTTATGCTGCACTATTTGATTGCTTGGAGTGCAGGCTGCCAAGGACATCATTGGAGAGATTAAGGGTTGAGAAGATGCTTTTCGGTGAGGAAATCAAGAACATTGTCGCGTGCGAGGGATTTGAACGAAGGGAAAGGCACGAGAAGCTGGATAAGTGGATCCAGAGATTTTATTTGGCTGGATTTGGTAACATGCCCTTAAGCTATTTTGGTATGCTGCAAGCAAAGAGGTTCTTGCAGAGCTATAGATGTGACGGATACAAAATGAGAGAGGAAAATGGTTGTGTATTAATTTGTTGGCAAGATAGGCCCTTGTTTTCAGTATCAGCTTGGAGACCTCGAAAGTAA 1380 0.429 MQEEGSSSVTSLSLSPSLGSPRPMLKELRSEERGLCLIHLLLTCGNHVAAGNVETANVLLGQSSMLASPEGDTMQRIAAYFTEALADRMLKAWPGLHRALNSTRIVMVSEEVLTRKLFYEIFPFMKIAFVLTNQAIIEAMQGEKMIHIIDLNAVESAQWLALFQILSARPEGPPHLRITGVHHKKEILDQIAYRLVEEAEKLDIPFQFNPVVSKLESLDFEKLRVKTGEALAIISMLQLHSLLACDDEGRRNPHLAGTSNAIPRQRRQPMFQSSSSEKDTANEYAPSPDSSSSSPASLTTSNSKHMESFLNALCGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLECRLPRTSLERLRVEKMLFGEEIKNIVACEGFERRERHEKLDKWIQRFYLAGFGNMPLSYFGMLQAKRFLQSYRCDGYKMREENGCVLICWQDRPLFSVSAWRPRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01013 459 Pfam GRAS domain family 37 456 IPR005202 -
Arst3g01013 459 MobiDBLite consensus disorder prediction 254 301 - -
Arst3g01013 459 MobiDBLite consensus disorder prediction 1 18 - -
Arst3g01013 459 MobiDBLite consensus disorder prediction 1 23 - -
Arst3g01013 459 ProSiteProfiles GRAS family profile. 28 456 IPR005202 -
Arst3g01013 459 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 452 IPR005202 -
Arst3g01013 459 MobiDBLite consensus disorder prediction 258 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01013 Arst-Chr3 7615839 7618156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01013 2 459 GRAS Transcription Factor Family AT1G50420 62.292 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst3g01013 GRAS 1.3e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01013 - - gmx:100814131 676.396