Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01008 ATGCTTCAAAGCTTGGTCCCTCGTTCGCCTATTACTCCAAACCCTAACTCCATGAAGACCAAGCGTGACCGCCACGACGCCACCGCTGATTCCCCCACTGACGAGGAGCCTTCCTTCAAGCGCGCTAACTTCTCCGGTGAGAAGTCATCGGCGCAGGCCGTGGGAGAAGCTGAGGGACACCACGAAGAACAGCAGCAACAGGTGCTGGAAGTGGCGGAGGCCAGAGGAGGAGAATCAACCGGCCTTAAGCTCCTCGGTTTGCTGCTCCAATGCGCAGAGTGCGTCGCCATGGACAACCTTGACTTCGCGAACGACCTCCTCCCGGAGATCGCGGAGCTCTCGTCGCCATTCGGAACCTCGCCGGAGCGCGTCGGCGCGTACTTCGCACAGGCTCTGCAGGCTCGCGTGGTGAGCTCATGCCTCGGAGCGTACTCACCTCTCACCGCGAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCGTTCCAGTCCTACAACTCAGTGTCGCCGCTCGTCAAGTTCTCTCACTTCACCGCAAACCAAGCGATCTTCCAAGCTCTCGACGGCGAGGATCGCGTCCACATCATCGACCTCGACATCATGCAAGGTCTTCAATGGCCAGGACTCTTCCACATCCTTGCCTCGCGATCCAGGAAGATCCGCTCCATGCGGATCACCGGATTTGGTTCCTCGTCGGAGCTTCTAGAATCCACCGGAAGACGCCTCGCCGATTTCGCTAGCTCGCTCGGTTTGCCGTTCGAGTTTCATCCGGTGGAAGGAAAAATCGGAAGCATCACGGACCTGAGTCAACTCGGCGTTCGACCAAATGAAGCGATCGTAGTTCACTGGATGCACCATTGCTTATACGACATAACAGGGAGCGATTTAGGGACGTTGAGATTGCTGAGTCAGCTGAGGCCGAAGCTGATCACGACGGTGGAGCAGGATCTGAGCCACGCCGGGAGCTTCCTCGCGAGGTTCGTGGAGGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTGGGAGACGGTTTGGGTGCGGACAGTTTGGAGAGGCACACGGTAGAGCAGCAGCTTCTAGGGTGCGAGATCAGGAACATCGTGGCCGTTGGAGGTCCCAAGAGGACCGGCGAGGTTAAAGTGGAGCGCTGGGGAGAGGAGTTGAGACGGGTCGGTTTTCGACCCGTTTCGCTTCGGGGAAACCCGGCCTCGCAGGCTAGTTTGCTCCTTGGGATGTTCCCTTGGAGAGGGTATACCCTCGTTGAGGAAAACGGTTCTCTCAAGCTTGGTTGGAAGGATCTTTCTTTGTTGACCGCTTCTGCTTGGCAACCGTCGGATTTGGTTACTTATCCTGATTGA 1365 0.5722 MLQSLVPRSPITPNPNSMKTKRDRHDATADSPTDEEPSFKRANFSGEKSSAQAVGEAEGHHEEQQQQVLEVAEARGGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGAYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSRKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFHPVEGKIGSITDLSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLSQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWGEELRRVGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLTASAWQPSDLVTYPD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01008 454 MobiDBLite consensus disorder prediction 18 42 - -
Arst3g01008 454 MobiDBLite consensus disorder prediction 1 17 - -
Arst3g01008 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 64 440 IPR005202 -
Arst3g01008 454 ProSiteProfiles GRAS family profile. 75 445 IPR005202 -
Arst3g01008 454 MobiDBLite consensus disorder prediction 1 64 - -
Arst3g01008 454 Pfam GRAS domain family 86 445 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01008 Arst-Chr3 7515903 7518055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01008 79 448 GRAS Transcription Factor Family AT5G41920 73.067 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst3g01008 GRAS 3.4e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01008 - - gmx:100816249 763.451