Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01007 ATGATTGATATGGGTTCTTCATCAGTAATAGAAGGTGAAGTTACACTTCCAGGATTCAGGTTTCACCCTACTGAAGAAGAGCTCCTTGATTTCTATCTCAAGAACATGGTCGTTGGAAAGAAGCTCCGTTTCGATGTCATCGGCTTCCTCAACATCTATCACCATGATCCCTGGGACTTGCCAGGATTGGCTAAAGTGGGAGAGAGGGAATGGTATTTCTTTGTGCCTCGGGACAGAAAGCATGGCACCGGGGGAAGGCCAAACCGGACCACCGAGAAAGGGTTCTGGAAAGCAACCGGTTCCGACCGTAAGATCGTTACCTTGTCTGATCCGAAGCGCATAATTGGATTGAGGAAGACACTGGTTTTCTATGAGGGAAGAGCTCCACGTGGATCCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTGCCCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGGAAGGCGACTTCGTTGAAAGTGTTGGAGCAAAGAGCAGCAATAGAGGAAGAGATGAAGCAAATGGTAGGTTCCCCTGAATCCACACCTTCCTCCACAGACACCATGTCCTATGAAGAACAACAACAGAATCAGAATCAGAATCAGAATCTGCAATTGTTACCACCACAACATGTTGTTACTAAGAAAGAGGTTGAAGCTGAACTTGAAGAGGAAAAAATGGTACATGTTACATTGGCAACAACAAAGCAAGAAAACAAGGACACAACAAAGAACAATAAAAGTAGTTGTTGTGGTAACACAAACACTAACAGTAACACAAGTAGTCTTCAATTGCCATTTGGGAAGGATAAGATCCCAGAGCTTCAAATGCCTATGATGATCACTGATTGGACCCAAGACACATTTTGGGCTCAATTGAATAGTCCTTGGCTCCAAAACTATACCTACTCCAACATATTAAACTTCTAG 948 0.4367 MIDMGSSSVIEGEVTLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEYRLPDNCPLPKDIVLCKIYRKATSLKVLEQRAAIEEEMKQMVGSPESTPSSTDTMSYEEQQQNQNQNQNLQLLPPQHVVTKKEVEAELEEEKMVHVTLATTKQENKDTTKNNKSSCCGNTNTNSNTSSLQLPFGKDKIPELQMPMMITDWTQDTFWAQLNSPWLQNYTYSNILNF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01007 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 247 - -
Arst3g01007 315 MobiDBLite consensus disorder prediction 242 272 - -
Arst3g01007 315 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Arst3g01007 315 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Arst3g01007 315 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Arst3g01007 315 FunFam NAC domain-containing protein 67-like 24 165 - -
Arst3g01007 315 MobiDBLite consensus disorder prediction 178 209 - -
Arst3g01007 315 SUPERFAMILY NAC domain 10 161 IPR036093 GO:0003677|GO:0006355
Arst3g01007 315 MobiDBLite consensus disorder prediction 183 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01007 Arst-Chr3 7500549 7502829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01007 13 308 NAC Transcription Factor Family AT2G17040 58.108 4.96e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g01007 NAM 1.5e-34 No_clan