Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00995 ATGGAAGCTGTTTTATTCGCCGCTAATCCAGCTTCTCACCTCAAACTTCTTCCCACTCTCAAACAACCCTTCTCTTCCACCAACCACCTCCCCTTCCGCCACAAAACCAACCACGTCCACCTCCCTCCTCTCTCCGCACTCCAAAACCAGAGCCAGCCAACTCCCACCGAAGATGAATCCTACGGCGAGGTCAAGAAAATCATCGGAAGCAGAGCCCTCGAAGATGCCACTGGAATGGAGTACCTCATAGAGTGGAAAGACGGTCATGCCCCTTCTTGGGTCCCCTCTGACTTCATAGCCAAAGACGTCCTCTCCGAATACGAGTCTCCCTGGTGGACCGCAGCTAAGAAAGCCGACCACGACGCACTCCGTCAAATCCTCGACTCCGATGATGGTCGGGACGTCAACGCCGTCGACTCAGACGGCCGCACTGCCCTCCTCTTCGTCGCTGGACTGGGTTCTGAGCCCTGCGTCCGCCTCCTCGCGGAGTCCGGCGCCGATGTCGACCACCGCGACAACGCCGGCGGCCTCACCGCTCTCCACATGGCGGCGGGTTACGTGAGGCCCGGCGTCGCGAAGCTTCTCCTGGACCTCGGTGCGGATCCGGAGAGGGAGCTTCTGAAGGCGACGCCGAAAGGGAATCCGATGCAGTTTGGGAGGAGGATTGGGTTGGAAGGGGTGGTTAGGGTTTTGGAAGGCGCGGTTTTCGAGTTCGCGGAGGTGGAGGAGATTATTGAGCGGAGGGGGAAGGGTGAGAATTTGGAGTACCTTGTGCGGTGGAAGGATGGTGGCGCCAACGAGTGGGTGAAGGCGAGGTTTGTGGCGGAGGATCTGGTTAGGGATTACGAAGCTGGCCTTGAGTACGCGGTGGCGGAGGCTGTGCTTGGGAAAAGGGTCGGCGATGAAGGGGGACCAGAGTTTTTAGTTAAGTGGGCTGATATGGATGAGCCCACTTGGGAGCCTGAGGAGAATGTGGATCCTGAACTCGTTAAGGAGTTTGAGTTAAGTAGTAATGGTCAGGTCCAAATTAGTAATGGGCCTATTCCGAGTAATGGGCCTGAAGTGGTGTTTTCGAATCAGGACAGCCTGTGA 1092 0.5723 MEAVLFAANPASHLKLLPTLKQPFSSTNHLPFRHKTNHVHLPPLSALQNQSQPTPTEDESYGEVKKIIGSRALEDATGMEYLIEWKDGHAPSWVPSDFIAKDVLSEYESPWWTAAKKADHDALRQILDSDDGRDVNAVDSDGRTALLFVAGLGSEPCVRLLAESGADVDHRDNAGGLTALHMAAGYVRPGVAKLLLDLGADPDXRELLKATPKGNPMQFGRRIGLEGVVRVLEGAVFEFAEVEEIIERRGKGENLEYLVRWKDGGANEWVKARFVAEDLVRDYEAGLEYAVAEAVLGKRVGDEGGPEFLVKWADMDEPTWEPEENVDPELVKEFELSSNGQVQISNGPIPSNGPEVVFSNQDSL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00995 364 SUPERFAMILY Ankyrin repeat 107 212 IPR036770 -
Arst3g00995 364 MobiDBLite consensus disorder prediction 41 62 - -
Arst3g00995 364 SUPERFAMILY Chromo domain-like 57 111 IPR016197 -
Arst3g00995 364 Gene3D - 58 105 - -
Arst3g00995 364 Gene3D - 236 285 - -
Arst3g00995 364 ProSiteProfiles Chromo and chromo shadow domain profile. 290 335 IPR000953 -
Arst3g00995 364 PANTHER MYOTROPHIN 97 206 - -
Arst3g00995 364 MobiDBLite consensus disorder prediction 42 58 - -
Arst3g00995 364 ProSiteProfiles Ankyrin repeat region circular profile. 141 173 - -
Arst3g00995 364 Gene3D - 106 235 IPR036770 -
Arst3g00995 364 CDD CD3_cpSRP43_like 287 336 IPR030300 -
Arst3g00995 364 MobiDBLite consensus disorder prediction 339 364 - -
Arst3g00995 364 ProSiteProfiles Ankyrin repeat profile. 175 207 IPR002110 GO:0005515
Arst3g00995 364 SMART chromo_7 238 288 IPR000953 -
Arst3g00995 364 SMART chromo_7 60 112 IPR000953 -
Arst3g00995 364 SMART chromo_7 289 339 IPR000953 -
Arst3g00995 364 SMART ANK_2a 175 204 IPR002110 GO:0005515
Arst3g00995 364 SMART ANK_2a 106 137 IPR002110 GO:0005515
Arst3g00995 364 SMART ANK_2a 141 170 IPR002110 GO:0005515
Arst3g00995 364 SUPERFAMILY Chromo domain-like 288 335 IPR016197 -
Arst3g00995 364 Gene3D - 286 336 - -
Arst3g00995 364 Pfam Chromo (CHRromatin Organisation MOdifier) domain 292 335 IPR023780 -
Arst3g00995 364 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Arst3g00995 364 Pfam Ankyrin repeats (3 copies) 114 204 IPR002110 GO:0005515
Arst3g00995 364 SUPERFAMILY Chromo domain-like 238 285 IPR016197 -
Arst3g00995 364 ProSiteProfiles Ankyrin repeat region circular profile. 175 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00995 114 200 Ion Channels AT2G25600 42.529 6.41e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00995 K12271 - gmx:100818382 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00995 3 7291569 7292904 Arst3g00995 3 7291569 7292904 ECH