Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00991 ATGTTCCGTTACGACCTCTTCGACGAGACGCAGAACAAGCTCGATTACATCCTCTCTCTCACCGTCGAGAACTTGCTCGGGCGCCGCCTCCATACTCTCGTCTTCAAGTCTGGTATAGCCAAGTCCATTCACCAGCGCTACATTAGCTCAAAATTAAAGCCACAGAGGAGGTTGATTAAGCTGGAGGCTTTGGAGAAAGTCATCCATGAAAGAATAGATGCTCCCAGAGCACCTAGGCAGTGGTGGTTTGGCAAGGGGACTGACTTGACTCCTTCTTACATTTTCGAGGATGATGTTAAACACTTCCATTCGGTATATTCTCAATGCAAAAAGTATTAG 339 0.469 MFRYDLFDETQNKLDYILSLTVENLLGRRLHTLVFKSGIAKSIHQRYISSKLKPQRRLIKLEALEKVIHERIDAPRAPRQWWFGKGTDLTPSYIFEDDVKHFHSVYSQCKKY 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00991 112 Gene3D Coproporphyrinogen III oxidase, aerobic 36 112 IPR036406 GO:0004109|GO:0006779
Arst3g00991 112 Pfam Coproporphyrinogen III oxidase 75 108 IPR001260 GO:0004109|GO:0006779
Arst3g00991 112 PANTHER COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL 65 109 IPR001260 GO:0004109|GO:0006779
Arst3g00991 112 SUPERFAMILY Coproporphyrinogen III oxidase 73 107 IPR036406 GO:0004109|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00991 Arst-Chr3 7238877 7240258 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00991 1 44 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 77.273 5.57e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00991 K00228 K02997 adu:107465882 216.468