Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00989 ATGTTCCGTTACGACCTCTTCGACGAGACGCAGAACAAGCTCGATTACATCCTCTCTCTCACTGTCGAGAACTTGCTCGGGCGCCGCCTCCATACTCTCGTCTTCAAGTCTGGTATAGCCAAGTCCATTCACCAGCGCTACATTAGCTCAAAATTAAAGCCACAGAGGAGGTTGATTAAGCTGGAGGCTTTGGAGAAAGTCATCCATGAAAGAATAGATGCTCCCAGAGCACCTAGGCAGTGGTGGTTTGGCAAGGGGACTGACTTGACTCCTTCTTACATTTTCGAGGATGATGTTAAACACTTCCATTCGGTTAAACTTAAAGAACTTGAAGCTGGTCTGCTTGAGAATAAGGCAAATAATTAG 366 0.4617 MFRYDLFDETQNKLDYILSLTVENLLGRRLHTLVFKSGIAKSIHQRYISSKLKPQRRLIKLEALEKVIHERIDAPRAPRQWWFGKGTDLTPSYIFEDDVKHFHSVKLKELEAGLLENKANN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00989 121 Gene3D Coproporphyrinogen III oxidase, aerobic 39 112 IPR036406 GO:0004109|GO:0006779
Arst3g00989 121 PANTHER COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL 65 106 IPR001260 GO:0004109|GO:0006779
Arst3g00989 121 SUPERFAMILY Coproporphyrinogen III oxidase 73 105 IPR036406 GO:0004109|GO:0006779
Arst3g00989 121 Pfam Coproporphyrinogen III oxidase 75 106 IPR001260 GO:0004109|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00989 Arst-Chr3 7221589 7223238 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00989 1 44 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 77.273 1.03e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00989 - - adu:107465882 246.514