Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00904 ATGAATGAGGGATCTTTGGGCGGCGAGAAGTTGCAGCGGGAATGTAATTTTGATTTGAACGTCGAGGTGTGCGAAGATGTCAAGGAAACCTGCGTCAATGTTGCCAATGGGAATGGTATTTATGAGGCAACTGTCATATCGGGTAAGATGGGTCAGCTCCAAAGAGACATGACAAATCTTAATCAGAGATCTATGGAAGTTGATGATGTTCGTAGTGATTTGAATGATGTTTCCAAAGATTCCACGCCAAAGGATGTTCCTGTAACTGTAATATCTGGTCATGAACAGTCCAAAATTTTTCAGGCAAAGTTGCAATTACCCTCTTCTTCCCAAGATTTAAATTCAGACGATGTTCATGTTCTTGAAGTCTTTTCTATTTATGCTTGTTTAAGGTCATTCAATACTTTATTAATTTTGAGTCCATTTACGTTGGAGGATCTTGTAGCTGCTTTGAAGTCCAAAATTCTAAGTATATTATTTGATAGCATTCATGTTTCTATTTTGGAAACTCTGAAAAAGCATTTGGAATACCTTTCCAATGAAGGAATCTTAATTGAGATTTTCTGGACATTGTCACATGACCTATTTTCATGGCCGAGTATCTTTTGA 609 0.3727 MNEGSLGGEKLQRECNFDLNVEVCEDVKETCVNVANGNGIYEATVISGKMGQLQRDMTNLNQRSMEVDDVRSDLNDVSKDSTPKDVPVTVISGHEQSKIFQAKLQLPSSSQDLNSDDVHVLEVFSIYACLRSFNTLLILSPFTLEDLVAALKSKILSILFDSIHVSILETLKKHLEYLSNEGILIEIFWTLSHDLFSWPSIF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00904 202 SMART testlast3 117 177 IPR018501 -
Arst3g00904 202 ProSiteProfiles DDT domain profile. 117 177 IPR018501 -
Arst3g00904 202 PANTHER PHD FINGER FAMILY PROTEIN 63 182 - -
Arst3g00904 202 Pfam DDT domain 120 172 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00904 Arst-Chr3 6651900 6653310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00904 103 184 PHD Transcription Factor Family AT5G12400 58.537 2.83e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Arst3g00904 DDT 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00904 - - adu:107485507 317.39