Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00890 ATGTACTTGAGGAGAATACAGTGTAGGGACCGGAGATGGGCTTTCGTATTGCAGCCATCAAAATACTCTTTTAGTCCAAGATTCTCAGATCATGCAAACTTGCAATCTTTTTCCTCCAAGACCACTGTGAGAGCATATGCTTCTCATGGTAGTTTCTTGAGAAGACATCTTTTAGGTTCAGATTCATATAGCTCTGCTTCATATAGAAATAATTGTATTGGTCTGGACAAAAGGACTAGTTTATGTATAAGTACTCAGTTACGTGCATATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAACATGTGCACGTTAAAGATGGAGCTAACATTGATAAAGGGAAAAATCAGAAAGAGAAGTTTGACAAAGATGTCAAGTATTGCAATGAGCATGCACGACTTGGCGAGCAGGATCAAGCGGAATGGCTTCATAATGAGAAACTTGGAATAGAAAGTAAGAAGAAAGAATCACCATTTTTGACAAGAAGGGATAAGTTCAGAAATGAGTTTCTAAGAAGAATTGTTCCTTGGGAGAAAATAAACATTTCATGGGACTCATTTCCTTATCATGTCAATGAGCACACCAAGAATCTACTGGTGGAATGTACTGCTTCACATTTGAGACATAATTCATTCGCTTCATCTTTTGGTGTTCGTCTCACATCTTCAAGTGGGAGGATATTGCTTCAGAGTGTTCCTGGCACTGAACTCTATCGTGAGAGGCTAGTTAAAGCTCTTGCACATGATTTACAAGTTCCATTATTAGTTCTTGATAGTAGCATCCTTGCTCCTTATGACATTGATGATGAATTATCATCAGACTATGAGTCTGAAGATGATAATGCAGACTCCGGGGCAGAGGGCTCTTTGGAGTCAGAGAATGAGGATGATAATGATGCTGGCAATGAAGAAGAGTGGACTAGCAGTAATGAAGTGAAGTCGGATGCAAGTGAAAATGAAAATGATAATGATGATGCAATTGCATCGGCTGAGGCTGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAAAAGATATCATCTGGAGAATCTGAGAGTTCTGAGTCATCTAGGTCTAATGAAGCCAATTCTTCTGATAAATCTGGGTGCCAGATAAGAAAAGGTGACCGAGTGAAGTACATTGGACCATCTACTCGAGCTACAATTGATGATAGGCCTTTAACCACTGGTCAGAGAGGAGAGGTATATGAAGTAAGCGGAGATCAAGTTGCTGTCATAATGGATATTAATGAAGATCGTGGCAATGAGGGTGGGGCAGAGAATCTTAGTAGTGACCATCATACAAAACCACCGATTCGTTGGCTACATGTTAAGGACATTGAGAATGATCTTGATGCTCAAGCACTAGATTGCTATATAGCACTGGAGGCTTTATGTGAGGTTTTGCATTCGAAACAACCGCTCATTGTCTACTTTCCAGATGGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAACCGTAATGAGTTTTTTCACAAGGTTGAAGAGCTGTTTGATCGGTTATCTGGCCCCGTTGTGTTGATCTGTGGGCAAAACAAAGTTCAATCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAACTTTGGACGAGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGATTCAGAGGTGCAAAGAGATCAGAAGATGATGAAATTCACAAGCTTTTTTCTAATGTTTTGTGCGTACACCCACCTAAGGATGAAAATGTGCTGGTAACATTTAAGAAACAACTTGAAGAAGACAGGAAAATTGTCGTTTCAAGAAGTAATTTGAATGAATTAAGGAAGGTTCTCGAAGAACATCAGCTGTCATGTGTGGATCTATTGCATGTAAACACTGATGGTGTTATTTTGACAAAGCAAAAAGCTGAAAAAGTTATTGGGTGGTCGAAAAACCATTACTTATCATCATGTCTGCTCCCTTCTGTGAAAGGAGAACGGTTGTGCATCCCTCGTGAAAGTCTTGAGATTGCAATCTCAAGGTTGAAGGGCCAGGAAAATATATCACAGAAGCCTTCCCAAAACCTTAAGAACCTTGCGAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTGGTACCCCCTGGTGAAATTGGGGTGAAGTTTGATGATATAGGTGCTCTTGAAAACGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCGATGAGAAGACCAGAACTCTTCTCTCGTGGTAACTTGTTGCGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGAACTGGAAAAACACTTCTGGCCAAAGCACTTGCAACTGAAGCTGGTGCAAATTTTATTAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCAGAAAAACTAACAAAAGCTCTTTTCTCCTTTGCTAGCAAGCTTTCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGTGGTGGTGCTTTTGAGCATGAAGCCACTAGGAGGATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGATCAAAAGAAAATCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGACCTTGACGATGCTGTCATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCTGATGCCGAAAATCGAATGAAGATTTTGAGAATATTTCTTGCACAAGAGAATTTGGATCCTAATTTTGAGTATGACAAACTTGCTAACTTGACTGAAGGATACTCTGGCAGTGATTTGAAGAACCTTTGTGTTGCTGCGGCATACAGACCTGTTCAAGAGCTCATAGAGGAAGAAAACATTGCACAGGGAGGGACTAATAGTACAACTACAGTATTAAGGCCTCTTAATTTGGATGATTTTATTCAGTCAAAATCCAAGGTGGGTCCATCGGTGGCATACGATGCAACAAGTATGAATGAGCTGAGGAAGTGGAATGAAATGTATGGTGAAGGTGGTAGTAGGACCAAAGCATCATTCGGATTTTGA 3063 0.4019 MYLRRIQCRDRRWAFVLQPSKYSFSPRFSDHANLQSFSSKTTVRAYASHGSFLRRHLLGSDSYSSASYRNNCIGLDKRTSLCISTQLRAYSSESDGRNASEDKHVHVKDGANIDKGKNQKEKFDKDVKYCNEHARLGEQDQAEWLHNEKLGIESKKKESPFLTRRDKFRNEFLRRIVPWEKINISWDSFPYHVNEHTKNLLVECTASHLRHNSFASSFGVRLTSSSGRILLQSVPGTELYRERLVKALAHDLQVPLLVLDSSILAPYDIDDELSSDYESEDDNADSGAEGSLESENEDDNDAGNEEEWTSSNEVKSDASENENDNDDAIASAEAALKKVKAAVQKLVPYNIEEFEKISSGESESSESSRSNEANSSDKSGCQIRKGDRVKYIGPSTRATIDDRPLTTGQRGEVYEVSGDQVAVIMDINEDRGNEGGAENLSSDHHTKPPIRWLHVKDIENDLDAQALDCYIALEALCEVLHSKQPLIVYFPDGSQWLHKSVPKSNRNEFFHKVEELFDRLSGPVVLICGQNKVQSGSKEKEQFTMILPNFGRVAKLPLSLKRLTEGFRGAKRSEDDEIHKLFSNVLCVHPPKDENVLVTFKKQLEEDRKIVVSRSNLNELRKVLEEHQLSCVDLLHVNTDGVILTKQKAEKVIGWSKNHYLSSCLLPSVKGERLCIPRESLEIAISRLKGQENISQKPSQNLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALENVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLSPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDPNFEYDKLANLTEGYSGSDLKNLCVAAAYRPVQELIEEENIAQGGTNSTTTVLRPLNLDDFIQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKASFGF 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00890 1020 MobiDBLite consensus disorder prediction 273 306 - -
Arst3g00890 1020 Gene3D - 725 993 IPR027417 -
Arst3g00890 1020 Pfam AAA+ lid domain 921 956 IPR041569 -
Arst3g00890 1020 MobiDBLite consensus disorder prediction 308 322 - -
Arst3g00890 1020 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 167 1015 - -
Arst3g00890 1020 SMART AAA_5 763 900 IPR003593 GO:0016887
Arst3g00890 1020 ProSitePatterns AAA-protein family signature. 870 889 IPR003960 GO:0005524|GO:0016887
Arst3g00890 1020 MobiDBLite consensus disorder prediction 357 386 - -
Arst3g00890 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 725 947 IPR027417 -
Arst3g00890 1020 MobiDBLite consensus disorder prediction 273 324 - -
Arst3g00890 1020 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 725 901 - -
Arst3g00890 1020 Gene3D - 899 984 - -
Arst3g00890 1020 MobiDBLite consensus disorder prediction 363 380 - -
Arst3g00890 1020 Pfam ATPase family associated with various cellular activities (AAA) 767 897 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00890 Arst-Chr3 6514909 6525954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00890 726 976 Calmodulin-binding Proteins AT3G56690 35.433 5.93e-40 158