Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00889 ATGTACTTGAGGAGAATACAGTGTAGGGACCGGAGATGGGCTTTCGTATTGCAGCCATCAAAATACTCTTTTAGTCCAAGATTCTCAGATCATGCAAACTTGCAATCTTTTTCCTCCAAGACCACTGTGAGAGCATATGCTTCTCATGGTAGTTTCTTGAGAAGACATCTTTTAGGTTCAGATTCATATAGCTCTGCTTCATATAGAAATAATTGTATTGGTCTGGACAAAAGGACTAGTTTATGTATAAGTACTCAGTTACGTGCATATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAACATGTGCACGTTAAAGATGGAGCTAACATTGATAAAGGGAAAAATCAGAAAGAGAAGTTTGACAAAGATGTCAAGTATTGCAATGAGCATGCACGACTTGGCGAGCAGGATCAAGCGGAATGGCTTCATAATGAGAAACTTGGAATAGAAAGTAAGAAGAAAGAATCACCATTTTTGACAAGAAGGGATAAGTTCAGAAATGAGTTTCTAAGAAGAATTGTTCCTTGGGAGAAAATAAACATTTCATGGGACTCATTTCCTTATCATGTCAATGAGCACACCAAGAATCTACTGGTGGAATGTACTGCTTCACATTTGAGACATAATTCATTCGCTTCATCTTTTGGTGTTCGTCTCACATCTTCAAGTGGGAGGATATTGCTTCAGAGTGTTCCTGGCACTGAACTCTATCGTGAGAGGCTAGTTAAAGCTCTTGCACATGATTTACAAGTTCCATTATTAGTTCTTGATAGTAGCATCCTTGCTCCTTATGACATTGATGATGAATTATCATCAGACTATGAGTCTGAAGATGATAATGCAGACTCCGGGGCAGAGGGCTCTTTGGAGTCAGAGAATGAGGATGATAATGATGCTGGCAATGAAGAAGAGTGGACTAGCAGTAATGAAGTGAAGTCGGATGCAAGTGAAAATGAAAATGATAATGATGATGCAATTGCATCGGCTGAGGCTGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAAAAGATATCATCTGGAGAATCTGAGAGTTCTGAGTCATCTAGGTCTAATGAAGCCAATTCTTCTGATAAATCTGGGTGCCAGATAAGAAAAGGTGACCGAGTGAAGTACATTGGACCATCTACTCGAGCTACAATTGATGATAGGATCAGATTGGGGAAGATACTGACATCTGATGGGTCAACTAGTGCTTATACTGTTATACATGGCAGGCCTTTAACCACTGGTCAGAGAGGAGAGGTATATGAAGTAAGCGGAGATCAAGTTGCTGTCATAATGGATATTAATGAAGATCGTGGCAATGAGGGTGGGGCAGAGAATCTTAGTAGTGACCATCATACAAAACCACCGATTCGTTGGCTACATGTTAAGGACATTGAGAATGATCTTGATGCTCAAGCACTAGATTGCTATATAGCACTGGAGGCTTTATGTGAGGTTTTGCATTCGAAACAACCGCTCATTGTCTACTTTCCAGATGGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAACCGTAATGAGTTTTTTCACAAGGTTGAAGAGCTGTTTGATCGGTTATCTGGCCCCGTTGTGTTGATCTGTGGGCAAAACAAAGTTCAATCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAACTTTGGACGAGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGATTCAGAGGTGCAAAGAGATCAGAAGATGATGAAATTCACAAGCTTTTTTCTAATGTTTTGTGCGTACACCCACCTAAGGATGAAAATGTGCTGGTAACATTTAAGAAACAACTTGAAGAAGACAGGAAAATTGTCGTTTCAAGAAGTAATTTGAATGAATTAAGGAAGGTTCTCGAAGAACATCAGCTGTCATGTGTGGATCTATTGCATGTAAACACTGATGGTGTTATTTTGACAAAGCAAAAAGCTGAAAAAGTTATTGGGTGGTCGAAAAACCATTACTTATCATCATGTCTGCTCCCTTCTGTGAAAGGAGAACGGTTGTGCATCCCTCGTGAAAGTCTTGAGATTGCAATCTCAAGGTTGAAGGGCCAGGAAAATATATCACAGAAGCCTTCCCAAAACCTTAAGAACCTTGCGAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTGGTACCCCCTGGTGAAATTGGGGTGAAGTTTGATGATATAGGTGCTCTTGAAAACGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCGATGAGAAGACCAGAACTCTTCTCTCGTGGTAACTTGTTGCGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGAACTGGAAAAACACTTCTGGCCAAAGCACTTGCAACTGAAGCTGGTGCAAATTTTATTAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCAGAAAAACTAACAAAAGCTCTTTTCTCCTTTGCTAGCAAGCTTTCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGTGGTGGTGCTTTTGAGCATGAAGCCACTAGGAGGATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGATCAAAAGAAAATCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGACCTTGACGATGCTGTCATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCTGATGCCGAAAATCGAATGAAGATTTTGAGAATATTTCTTGCACAAGAGAATTTGGATCCTAATTTTGAGTATGACAAACTTGCTAACTTGACTGAAGGATACTCTGGCAGTGATTTGAAGAACCTTTGTGTTGCTGCGGCATACAGACCTGTTCAAGAGCTCATAGAGGAAGAAAACATTGCACAGGGAGGGACTAATAGTACAACTACAGTATTAAGGCCTCTTAATTTGGATGATTTTATTCAGTCAAAATCCAAGGTGGGTCCATCGGTGGCATACGATGCAACAAGTATGAATGAGCTGAGGAAGTGGAATGAAATGTATGGTGAAGGTGGTAGTAGGACCAAAGCATCATTCGGATTTTGA 3129 0.4024 MYLRRIQCRDRRWAFVLQPSKYSFSPRFSDHANLQSFSSKTTVRAYASHGSFLRRHLLGSDSYSSASYRNNCIGLDKRTSLCISTQLRAYSSESDGRNASEDKHVHVKDGANIDKGKNQKEKFDKDVKYCNEHARLGEQDQAEWLHNEKLGIESKKKESPFLTRRDKFRNEFLRRIVPWEKINISWDSFPYHVNEHTKNLLVECTASHLRHNSFASSFGVRLTSSSGRILLQSVPGTELYRERLVKALAHDLQVPLLVLDSSILAPYDIDDELSSDYESEDDNADSGAEGSLESENEDDNDAGNEEEWTSSNEVKSDASENENDNDDAIASAEAALKKVKAAVQKLVPYNIEEFEKISSGESESSESSRSNEANSSDKSGCQIRKGDRVKYIGPSTRATIDDRIRLGKILTSDGSTSAYTVIHGRPLTTGQRGEVYEVSGDQVAVIMDINEDRGNEGGAENLSSDHHTKPPIRWLHVKDIENDLDAQALDCYIALEALCEVLHSKQPLIVYFPDGSQWLHKSVPKSNRNEFFHKVEELFDRLSGPVVLICGQNKVQSGSKEKEQFTMILPNFGRVAKLPLSLKRLTEGFRGAKRSEDDEIHKLFSNVLCVHPPKDENVLVTFKKQLEEDRKIVVSRSNLNELRKVLEEHQLSCVDLLHVNTDGVILTKQKAEKVIGWSKNHYLSSCLLPSVKGERLCIPRESLEIAISRLKGQENISQKPSQNLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALENVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLSPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDPNFEYDKLANLTEGYSGSDLKNLCVAAAYRPVQELIEEENIAQGGTNSTTTVLRPLNLDDFIQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKASFGF 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00889 1042 Pfam ATPase family associated with various cellular activities (AAA) 789 919 IPR003959 GO:0005524|GO:0016887
Arst3g00889 1042 MobiDBLite consensus disorder prediction 273 306 - -
Arst3g00889 1042 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 747 923 - -
Arst3g00889 1042 MobiDBLite consensus disorder prediction 308 322 - -
Arst3g00889 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 747 969 IPR027417 -
Arst3g00889 1042 Gene3D - 747 1015 IPR027417 -
Arst3g00889 1042 SMART AAA_5 785 922 IPR003593 GO:0016887
Arst3g00889 1042 ProSitePatterns AAA-protein family signature. 892 911 IPR003960 GO:0005524|GO:0016887
Arst3g00889 1042 MobiDBLite consensus disorder prediction 273 324 - -
Arst3g00889 1042 MobiDBLite consensus disorder prediction 357 388 - -
Arst3g00889 1042 MobiDBLite consensus disorder prediction 363 380 - -
Arst3g00889 1042 Pfam AAA+ lid domain 943 978 IPR041569 -
Arst3g00889 1042 Gene3D - 921 1006 - -
Arst3g00889 1042 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 167 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00889 Arst-Chr3 6514909 6525956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00889 748 998 Calmodulin-binding Proteins AT3G56690 35.433 5.94e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00889 - - gmx:100802939 1620.14