Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00859 ATGATTGACCGGCTCGCGGAGTTTATGAATGTTGATTTGCAAGAGGCAAAGGATTCTCGGAAACGTTTTGACAAAGCTATGCATTCTTACGATCAGTCACGAGAAAAATTTGTATCTTTGAAGAAAAATACGCCGGAAGACGTTGTTGCTGAATTAGAAGAGGATCTACAAAATTCGAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTACACTCTCTCATGAATATCGAAGTGAAAAAGAAGTATGAGTTCTTGGAGTCCATTAGTGCGATAATGGATGCTCATCTAAGATACTTTAAGCTGGGCTATGAGTTATTGAGCCAAATGGAACCGTATATTCACCAGGTGTTAACATGTGCACAACAATCTAAAGAACTGGCTAATATTGAACAAGATAAGCTTGCAAAACGAATCCAAGAATATAGAACACAGGCCGAGTTGGAAAGCACACGAGCTTCTAACAACACGGAACCCTTGCCAGGTGCTGATGGCACACATGTTGTAGGTTTGAACACTTACAAAGGCTTTGAAGGAGGGATGCAGCCTGCGGCCAAAGGGGAGGTTCAAACAGTTAAACAGGGCTATCTATTAAAACGCTCTTCAAGCTCACGAGGAGATTGGAAACGGAGGTTCTTTGTACTTGATAACCAGGGGAGTTTATTTTATTACAGCATGAAGGGACCCAAACCCAAGGGTGCTCAGTCATATAATTATAATCGTCCTCCTGAACAAAATAGTGGCATGTTTGGTAGATTTCGATCAAGGCACAACAGGTCATCATCACAAAATGAGGATGCTTTGGGTTGTTGTTCAATTGATCTGTGCACATCCTCTATAAAGATGGATGCAGAGGATACAGATCTACGTCTTTGCTTCCGTATAATTTCTCCCTCAAAAACATATACACTGCAGGCAGAAAATGAAGCTGATAGGATGGACTGGGTAAACAAAATTACTGGGGCTGTCACGTCGCTCTTTAATTCTCACTTTCTTCAACAGCCTCGTTATGATAGAGAAAATAGAAACTCAGCAACTGGTGCTTCGTCAACTAGTCAATCAGAGGATGGTGACAAATATTTGATGGATGACATATATCCAAAGGAAGTCCATAGTGTCTCTAAGATTTTAAGGGGAATTCCTGGGAATGATAAATGTGCTGAATGCAGTGCTGCTGATCCGGACTGGGCATCTTTAAACCTTGGCATATTACTCTGTATAGAATGCTCTGGAGTGCATCGAAATCTTGGAGTTCATATCTCGAAGGTGAGATCTATAACATTAGATGTTAAGGTATGGGAGCCTACTATTTTGGATTTATTTGATAAGTTGGGTAATGCTTATTGTAATTCGATATGGGAAGGCATGCTTCTACTTGGTAATGAAAGAGTAGGTGAATCAAATGGGCCAGCAAAACCATGTTTCATGGATGCCTTCCAAGATAAGGAAAAGTACATACAGGCAAAGTATGTACAGAAATCATTAATTATCAGAGAAGAGGATGTTCCCGGGAATCCTTCAGTTTCTGTAAGAATCTGGCTAGCGGTTCAAGCTATGAATGTACGAGAAGTATATCGCCTTATTGTAATCTCAAACTCAAATGTAGTAAATACGAAATATGATGATGTGGTTTCCCATGCTGATGCTAAAGCCCTGGACTTAGAATGTATTATATTGGAAGGCCATGAGCAGGATTCTGAATCTTGCCTCAGCATTAAACAGACTAATGAGACACAGAAGTGTTTCCATGGTTGGTCATTATTACATCTAGCATGTCATTCTGAACATGCACTAATGGTTGAGTTGTTACTTCAATTTGCTGCTGATGTAAACATGCAAGACTATCATGGTAGAACACCCTTGCACCATTGCATCACCGGTGGAAAAAATTCACTGGCGAAGTTTCTGTTGAGAAGGGGTGCTAGACCGTCAGTTAAAGATGCCGGCGGACTCACTGTACTTGAAAGAGCAATGGAGATGGGGGCAATAACCGACGAAGAACTATTCATCATGCTTGCTGAACACCAGTAA 2031 0.4077 MIDRLAEFMNVDLQEAKDSRKRFDKAMHSYDQSREKFVSLKKNTPEDVVAELEEDLQNSKSAFEKSRFNLVHSLMNIEVKKKYEFLESISAIMDAHLRYFKLGYELLSQMEPYIHQVLTCAQQSKELANIEQDKLAKRIQEYRTQAELESTRASNNTEPLPGADGTHVVGLNTYKGFEGGMQPAAKGEVQTVKQGYLLKRSSSSRGDWKRRFFVLDNQGSLFYYSMKGPKPKGAQSYNYNRPPEQNSGMFGRFRSRHNRSSSQNEDALGCCSIDLCTSSIKMDAEDTDLRLCFRIISPSKTYTLQAENEADRMDWVNKITGAVTSLFNSHFLQQPRYDRENRNSATGASSTSQSEDGDKYLMDDIYPKEVHSVSKILRGIPGNDKCAECSAADPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTILDLFDKLGNAYCNSIWEGMLLLGNERVGESNGPAKPCFMDAFQDKEKYIQAKYVQKSLIIREEDVPGNPSVSVRIWLAVQAMNVREVYRLIVISNSNVVNTKYDDVVSHADAKALDLECIILEGHEQDSESCLSIKQTNETQKCFHGWSLLHLACHSEHALMVELLLQFAADVNMQDYHGRTPLHHCITGGKNSLAKFLLRRGARPSVKDAGGLTVLERAMEMGAITDEELFIMLAEHQ 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00859 676 Gene3D - 184 336 IPR011993 -
Arst3g00859 676 Coils Coil 125 145 - -
Arst3g00859 676 ProSiteProfiles Ankyrin repeat region circular profile. 616 647 - -
Arst3g00859 676 SUPERFAMILY PH domain-like 190 323 - -
Arst3g00859 676 SUPERFAMILY ArfGap/RecO-like zinc finger 373 496 IPR037278 -
Arst3g00859 676 PRINTS HIV Rev interacting protein signature 383 402 IPR001164 GO:0005096
Arst3g00859 676 PRINTS HIV Rev interacting protein signature 425 446 IPR001164 GO:0005096
Arst3g00859 676 PRINTS HIV Rev interacting protein signature 402 419 IPR001164 GO:0005096
Arst3g00859 676 Gene3D - 515 669 IPR036770 -
Arst3g00859 676 Pfam Ankyrin repeats (3 copies) 576 647 IPR002110 GO:0005515
Arst3g00859 676 MobiDBLite consensus disorder prediction 146 161 - -
Arst3g00859 676 ProSiteProfiles Ankyrin repeat region circular profile. 583 614 - -
Arst3g00859 676 PANTHER CENTAURIN/ARF 2 674 IPR045258 GO:0005096
Arst3g00859 676 CDD PH_ACAP 193 328 - -
Arst3g00859 676 ProSiteProfiles PH domain profile. 190 324 IPR001849 -
Arst3g00859 676 Pfam BAR domain of APPL family 1 126 IPR004148 GO:0005515|GO:0005737
Arst3g00859 676 MobiDBLite consensus disorder prediction 338 359 - -
Arst3g00859 676 Pfam PH domain 192 322 IPR001849 -
Arst3g00859 676 ProSiteProfiles Ankyrin repeat profile. 616 648 IPR002110 GO:0005515
Arst3g00859 676 MobiDBLite consensus disorder prediction 146 165 - -
Arst3g00859 676 MobiDBLite consensus disorder prediction 338 356 - -
Arst3g00859 676 SUPERFAMILY BAR/IMD domain-like 2 213 IPR027267 -
Arst3g00859 676 Gene3D Arfaptin homology (AH) domain/BAR domain 1 148 IPR027267 -
Arst3g00859 676 SMART ANK_2a 583 612 IPR002110 GO:0005515
Arst3g00859 676 SMART ANK_2a 616 645 IPR002110 GO:0005515
Arst3g00859 676 SMART PH_update 191 326 IPR001849 -
Arst3g00859 676 SMART arf_gap_3 371 503 IPR001164 GO:0005096
Arst3g00859 676 Pfam Putative GTPase activating protein for Arf 374 495 IPR001164 GO:0005096
Arst3g00859 676 SUPERFAMILY Ankyrin repeat 520 671 IPR036770 -
Arst3g00859 676 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Arst3g00859 676 CDD ArfGap 375 490 - -
Arst3g00859 676 Gene3D Arf GTPase activating protein 361 503 IPR038508 -
Arst3g00859 676 ProSiteProfiles ARF GTPase-activating proteins domain profile. 371 503 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00859 Arst-Chr3 6288364 6297838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00859 383 490 C2H2 Transcription Factor Family AT4G21160 41.818 1.29e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00859 K12489 - gmx:100796740 1104.74