Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00833 ATGGATTGCATGAGAACCCAGAGCACCTTGTCTCATAGGAAGAACTGGAAATATGATGTGTTTGTGAGTTTCAGAGGCGAAACTCGCAACAACTTCACCGATCATCTTTATGCTGCTCTCCGCAGACACGGCATAGATGCCTTCAGGGATGATACTAAGCTCAAGAAAGGAGGACTTATATCAGAAGAGCTTCTGGAAGCTATTGAAGCATCACAGGTTCTGATTGTGGTCTTCTCAATGAATTATGCTTCCTCCACATGGTGCTTGCAAGAACTAGCAAAGATAGCTGATTGCATTCAAGTCCCGGGACACCGTGTTCTGCCTGTTTTCTGTGATGTGAGTCCATCTGAGGTCAGAAAGCAAAGTGGAAACTATGAAGAAGCCTTTGTGGAACATGAAGAAAGATTCAAAGGTGATACAGAGATGATGGAGCAAGTGCAAAGATGGAGGGGAGCTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATTTGAAGGATAAGTCACAATCCGCTGAGATTGAAAAAATTGTCAAAGCGGTAACCAACAGATTGAGTCTCAAACCATCATCAAGTGTATCTAATGATATAGTTGGAATTCACTCCCCTGTGCAAGAACTAGAAAAGCTTCTAGTTTTGGACTCAGAGGATGATGTTCGAGTTGTAGGAATTTGTGGAATGGGTGGCATAGGAAAGTCAACTCTTGCCAAGATTTTATATGAAAAGATCTTTCACCAATATGATGTTTCATGTTTTGTAGATGATGTGAGCAAAACTTACAAACATGATGGACCACTTGGTGTGCAAAAGCAACTTCTTTGTCAAGCTTTTATGGAAGAAAGTTTTTCGATGTGGAATCTTTCATTGGCAAATAATCTGATTCAAACTGGGTTACGCCATAGAAAGGTTCTCATAGTTCTGGATAATGTTGATAAGGAGATTCAGTTGGAGAAGTTGGCTTTAGAACGGGAATGGCTCGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGAAGTGGATCATGTTTATAAAGTTAAACTCTTAAATGATGAGAATGCTCACCAATTGTTTTGCAGAAAAGCTTTCAAATGTAATCATGTTGTAAAAGATTATGAAAGCCTGACAGATTCTGCATTAGCATATGCTAATGGACTTCCTTTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCTGAATGGAGTAGTGCATTGGTTAGACTGAAAGAAACTCCAACAAAAGATATTATGGATGTACTTCGAATCAGTTTTGATGGACTTGAGGATCCGGAAAAAGAAATATTTCTTGATATTGCCTGTTTCTTTCCCGATGATGAAGAAGATTATGTAAAAGATATTTTGCGTATTCGAAGATTTCATCCTGAGATTGGTATAAGAATTCTCATTGACAAATCACTCATAACTTGCAGTCGGTATTACATTGTTATGCATGATTTGTTGAGAGAGTTGGGTAGAAGTATTATTCGAGAAAAATCACCCAATGAACCAAGAAAGTGGAGCAGGTTATGGAACTATAGGGATCTAAGTGATGTCTTGTGGGAAAACAAGGCAGTGAAGAACCTTGAAGCCATAGTTCTGCCAAGATCTCTCAAAAATAGGGAAGAGTTGTCAAAAAAGGCAACATTGAAGGTTGAAGCTTTATCACAAATGAACCACCTTAAATTACTCATACTCAAAAAAGTGAATTTCTCAGGATGTCTTGATTTTCTTTCTAATCAGTTGAGATATCTTGATTGGGAAAAATACCCTTTCACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTATATCATAGCAATATCAAAGAACTCTGGGAGGGAACAAAGGATCTACATAACTTGACACACATAGAACTATGTCATTCCAAAAATCTCGTAAAGATACCAAATTTATCTCAAGCCCCAAATCTTGAGCATTTAGATATTAAAGGATGTATTAAACTTGTTCACCTTGATGCATCCGTTGGTTCTCTAGAAAAGCTTAGTTTCTTGAATCTGGAAAACTGCAAAAGTCTTGTTAGTATTCCCAATAGCATATTTCATCTTAATTCTCTTCAACATTTAAATCTGTCTGGCTGTTCAAAATTATTTAGATATCAGTTGTTAGAGAAACCAAGACAAAGCGAACAGTTGAATACAGATCAAAGTGTGCAAAGCCACATGACATCCTCCATATGCAAAACTCTTACAAGACCTCTCCATTTTTTCTATTCTAAAAGGCTTTCCAGTTCAGTTGATTTGTTGGTGCCTTCATTGTCACGTTTTCCAGCTTTGACATATCTTGACATAAGTTTCTGTAATCTAGTTCAAATACCTGAAGCTATTGGACAGTTACATTGTTTAGAAAGCTTAAACATAGGGGGAAACAATATTGTTACGCTACCTCATTGCATCAAAGAACTTCCCAAGCTAGGGGAGCTGAATTTGGAGTACTGTAACAATCTAAAGTGGCTGTCAAGTACCCTTTTGCCGATAGGAGGAGCTAGCCGTCAAAGTTGTTACTATGGAGGATTATATGTTTTCAACTGCCCCAATTTAAGTGACATGGAAGGTTGTTGTCTCACAGTAGTTTCATGGATGATAAAAGTGATTGAGGTGAACATGCAATGTTCTTTACTCAAATGCATCATTCAAGTTGTTATTCCAGGGAATAAAATTCCAAGGTGGTTCAACAAACAGAATACGGGTAATTCAGTGAGCCTGGATCCTTTTCCCATTGTGGATGACAATAATTGGATTGGCATTGCTTGTTGTGTAACATTTGTTGTACATCATGCTCCAATTCAATTGCTTAAACGTAGGAGTAGAGTGCTTGTAGGTTGTGGTTTTCGCTCTAAACCTCTGCATGAGAGCATTTATCCCGTTGTTCCAATACGTCTTGAGAAAGATTCGATCACAACTAAATTAGATCATATGCTGATAGTATTTTTCTCCCGGGAAGTTTTCATTAATCTTTTTGTAAGTTATTTAAAAAAAGGAGCATCTGATGTTGATAGCATTGAATTGGCAATCATGAGTGATTATCCAGAAGAAGTAGAACTGAAGAGTTGTGTTTACCGGTGGCTATATAAGGAAGATGTGGAACAATTTAACCCAACAATGATGTATACCGCCACTTCTTCAACTCAGCAGCACAAGTTCTTGGCAATTGAACATGTCCAATAA 3231 0.3776 MDCMRTQSTLSHRKNWKYDVFVSFRGETRNNFTDHLYAALRRHGIDAFRDDTKLKKGGLISEELLEAIEASQVLIVVFSMNYASSTWCLQELAKIADCIQVPGHRVLPVFCDVSPSEVRKQSGNYEEAFVEHEERFKGDTEMMEQVQRWRGALTQVANLSGWDLKDKSQSAEIEKIVKAVTNRLSLKPSSSVSNDIVGIHSPVQELEKLLVLDSEDDVRVVGICGMGGIGKSTLAKILYEKIFHQYDVSCFVDDVSKTYKHDGPLGVQKQLLCQAFMEESFSMWNLSLANNLIQTGLRHRKVLIVLDNVDKEIQLEKLALEREWLGRGSRIIIVSRDEHILREYEVDHVYKVKLLNDENAHQLFCRKAFKCNHVVKDYESLTDSALAYANGLPLAIKVLGSFLFGRDVSEWSSALVRLKETPTKDIMDVLRISFDGLEDPEKEIFLDIACFFPDDEEDYVKDILRIRRFHPEIGIRILIDKSLITCSRYYIVMHDLLRELGRSIIREKSPNEPRKWSRLWNYRDLSDVLWENKAVKNLEAIVLPRSLKNREELSKKATLKVEALSQMNHLKLLILKKVNFSGCLDFLSNQLRYLDWEKYPFTCLPSSFQPNKLVKLILYHSNIKELWEGTKDLHNLTHIELCHSKNLVKIPNLSQAPNLEHLDIKGCIKLVHLDASVGSLEKLSFLNLENCKSLVSIPNSIFHLNSLQHLNLSGCSKLFRYQLLEKPRQSEQLNTDQSVQSHMTSSICKTLTRPLHFFYSKRLSSSVDLLVPSLSRFPALTYLDISFCNLVQIPEAIGQLHCLESLNIGGNNIVTLPHCIKELPKLGELNLEYCNNLKWLSSTLLPIGGASRQSCYYGGLYVFNCPNLSDMEGCCLTVVSWMIKVIEVNMQCSLLKCIIQVVIPGNKIPRWFNKQNTGNSVSLDPFPIVDDNNWIGIACCVTFVVHHAPIQLLKRRSRVLVGCGFRSKPLHESIYPVVPIRLEKDSITTKLDHMLIVFFSREVFINLFVSYLKKGASDVDSIELAIMSDYPEEVELKSCVYRWLYKEDVEQFNPTMMYTATSSTQQHKFLAIEHVQ 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00833 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 720 IPR044974 GO:0006952
Arst3g00833 1076 Gene3D - 14 181 IPR035897 -
Arst3g00833 1076 SMART till_3 17 159 IPR000157 GO:0007165
Arst3g00833 1076 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Arst3g00833 1076 Pfam TIR domain 17 197 IPR000157 GO:0007165
Arst3g00833 1076 Pfam C-JID domain 903 1050 IPR045344 -
Arst3g00833 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Arst3g00833 1076 PRINTS Disease resistance protein signature 220 235 - -
Arst3g00833 1076 PRINTS Disease resistance protein signature 296 310 - -
Arst3g00833 1076 PRINTS Disease resistance protein signature 702 718 - -
Arst3g00833 1076 PRINTS Disease resistance protein signature 389 403 - -
Arst3g00833 1076 Gene3D Ribonuclease Inhibitor 758 882 IPR032675 -
Arst3g00833 1076 SUPERFAMILY L domain-like 492 844 - -
Arst3g00833 1076 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Arst3g00833 1076 Pfam NB-ARC domain 203 424 IPR002182 GO:0043531
Arst3g00833 1076 Gene3D - 182 349 IPR027417 -
Arst3g00833 1076 Gene3D Ribonuclease Inhibitor 537 747 IPR032675 -
Arst3g00833 1076 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Arst3g00833 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Arst3g00833 1076 Gene3D - 354 438 IPR042197 -
Arst3g00833 1076 Pfam Leucine rich repeat 778 836 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00833 Arst-Chr3 5997375 6001958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00833 18 829 WRKY Transcription Factor Family AT4G12020 30.889 1.32e-91 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00833 - - adu:107476580 1339.71