Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00825 ATGGAATGCGTGAGAATCCAGAGCACATTGTCTCACAGGAAGAATTGGAAATATGATGTGTTTGTGAGTTTCAGAGGCGAGACTCGCTTCAACTTCACCGATCATCTTTTTGCTGCTTTCCACAGACACGGCGTACTTGCCTTCAAGGATGATACAAAAATCGAGAAAGGAGGACCTATATCTGCAGGGCTTCTGCAAGCAATTGAAGGATCACAGGTTCTGATTGTGGTCTTCTCTATCAACTATGCTTCCTCCACATGGTGCTTGCAAGAACTCGCAAACATAGCTGATTGCATTCAAATCCCAGGACACACTGTTCTGCCAGTTTTCTATGATGTGAGTCCAACTGAGGTGAGAAGGCAAAGTGGAAATTTTGAAAAAGCATTTATGAAACACGAAGAAAGATTCAAAGATGATGCAGAGATGATGGAGCAAGTGGCAAGATGGAGGGGAGCTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATCTCAAGGATAAGTCACAATCTGCTGAGATTGAAAAAATTGTCAAAGCGGTAACAAACATATTGAGTCCCAAACCATCATCAAGTCTATCTAATGATGTAGTTGGGATGTACTCCCATTTAGAAGAACTAGAAAAGCTTCTAGTTTTGGACTCACATGATGATGTTCGAGTTTTAGGCATTTGTGGAATGGGTGGCATAGGAAAGTCAACTCTTGCCACCATTTTATATGAAAAAATCTCTCATCAATACGACATTTCATGCTTTATGGATGATGTAAGCAAAACTTATGCAGATTGTGGTCCAATTGGTGTGAAAAAGCAACTTCTTTGTCAAGCTTTCGTGGAAGAAGAATTTCTACTATGCAATCTTTCGGCAGCAACTAATTTGATTCAAAAGTATTTATGCCATAGAAAGGTTCTCATAGTTCTGGATAATGTTGATCAGGGGATTCAGTTGGAGAATTTGGCTTTAAAACGGGAATGGCTAAGTAGAGGGAGCAGAATAATCATAGTTTCTAGAGATGAACATATATTGAGAGAGCATGGAGTGGATGATGTTTACAAAGTTCAACTCTTAAATGATGAGAATGCTCTCCAATTATTTTGTAGAAAAGCTTTCAAATGTAACCATGTTATAGAAGGTTATGAAAGCCTGACAAATTCTGCATTAACATATGCTAATGGACTGCCATTAGCAATTAAAGTATTGGGTTCTTTTTTGTTTGGCCGAAGTATATCCGAATGGAGTAGTGCTTTGGTTAGATTGAGAGAAAACCCAACAAAAGATATTATGGATGTGTTACGAATAAGTTATGATGGACTTGAGGATATGGAAAAGGAAATGTTTCTTGATATTGCATGTTTTTTTTCTAACGAGAATGAATATTATGTAAAGAACATTTTATGTATTCGAGGGTTTCATCCTGATATTGGTATAAGAATTCTCATTGATAAATCACTTATAACTTGTGACCGGTCGGCCATAGTTATGCATGATCTGTTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAATCACCCAAAGAGCCAAGAAAGTGGAGCAGGTTATGGAATCAAAAGGATCTAAGCAATGTCTTGCGGGAAAACAAGATAGCAGAAAATCTTGAAGCCATAGTTCTACCAAGATTTCTTGAAATTAGGGAAGAGTTATCAGTTGAAGCATTATCACAAATGAGCTGCCTTAAATTACTCATACTCAGAGAAGTGAATTTCTCGGGATGCCTTAATTTTCTTTCTAGAGAGTTGGGATATATTGAATGGAAAGAATATCCTTTTACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTGCATCACAGCAACATCAAAGAACTCTGGGAGGGAATAAAGTCTTCTTGTTTGTATTATGGCTTAAGATTCTTCTTACCTTTCTATCTCACTCTCTTGACATTACAGGATCTACATAATTTGACACATTTGGAACTATGCTATTCCAAAAGCCTTGTAAACATACCAAATTTATCTCAGGCCCCAAATCTTTTGCGACTAGATCTTAAAGGATGTGTTAAACTTGTTCGCCTTCATCCATCCATTGGCTGTTTAAAAAACCTCGGTTACTTGAATCTGGAAAACTGCAGAAGTCTTGTTAGTATTCCCAACAACATATTTGATCTTAATTCTCTTTATAATTTAAATCTATCTGGCTGTTGGAAATTACTTAAAGATCAGTTGTTAGAGCAACCAAGGCAAAGCAAGCAGTTGAATACAGGTCAAAGTGTACAAAGGCACATGACATCCTCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTCTCTTCTAGATGGTGTCCCAATTCAGTTGGTTTATTGGTGCCTTCTTTGTCTCGTTTCCCAGCTTTGGAATCTCTTGACATAAGTTTCTGTAATCTAGTTGAAATTCCTGATGCTATTGGACAGTTATGTTGTTTAGAACGTTTAAACATAGGGGGGAACAATTTTGTTACACTACCTCATTGCATCAAGGAACTTCCCAAGCTAAGGGAGTTGAACTTGCAGTACTGTAAGAAACTAAAGTGGTTTCCAAGTACCCTTTTGCCCATAGGAGGAGGTAGCCATAGAAGATTTTACTATGGAGGATTATATGTTTTCAACTGCCCCAATTTGAGTGACAAGAAAGGTTGTGCTGTCACAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATGCTCTTTGCCCAGATGCACCATTAAAGTTATTATTCCGGAAAATAAAATTCCAAGGTGGTTCAACAAACAGAATACAGGTAATTCAATGAAAGTGGATTCATCTCCCATTGTGGATGACAATAATTGGATTGGCATTGCCTGTTGTGTGGCATTTGTTGTACATGATGATGATGCTCCAACTGAATATCCTCCTATTCTATTTGGTTGTGGTTTTCGTCGTAATCCAGATAAGGCCGTTTGTTCCATTGCTCCAATACGTCTTAAGAAAGATTGGATCACAACTGAATTAGATCATATGTTGTTAATGTTTTTATCCAGGGATGTTTTTATTAATAATTTTGTAAGTGCTTTAAAAGAAGGAGTATCTGATCTTGATGGTATTGAATTGGTTGCATTGGCTCGTTATCCAGAAGAAGTAGTAGAAGTGAAGAGTTGTGGGTACCGTTGGGTATCTAAGGAAGATTTGGAACATTTAAACCCAGAGAAGATGTATAGCGCCAACTCTTTAGCTTACAATCAGAAGCACAAGTTTCTGGAAATTCAAGATGACCAATAG 3279 0.3757 MECVRIQSTLSHRKNWKYDVFVSFRGETRFNFTDHLFAAFHRHGVLAFKDDTKIEKGGPISAGLLQAIEGSQVLIVVFSINYASSTWCLQELANIADCIQIPGHTVLPVFYDVSPTEVRRQSGNFEKAFMKHEERFKDDAEMMEQVARWRGALTQVANLSGWDLKDKSQSAEIEKIVKAVTNILSPKPSSSLSNDVVGMYSHLEELEKLLVLDSHDDVRVLGICGMGGIGKSTLATILYEKISHQYDISCFMDDVSKTYADCGPIGVKKQLLCQAFVEEEFLLCNLSAATNLIQKYLCHRKVLIVLDNVDQGIQLENLALKREWLSRGSRIIIVSRDEHILREHGVDDVYKVQLLNDENALQLFCRKAFKCNHVIEGYESLTNSALTYANGLPLAIKVLGSFLFGRSISEWSSALVRLRENPTKDIMDVLRISYDGLEDMEKEMFLDIACFFSNENEYYVKNILCIRGFHPDIGIRILIDKSLITCDRSAIVMHDLLRELGRSIVREKSPKEPRKWSRLWNQKDLSNVLRENKIAENLEAIVLPRFLEIREELSVEALSQMSCLKLLILREVNFSGCLNFLSRELGYIEWKEYPFTCLPSSFQPNKLVKLILHHSNIKELWEGIKSSCLYYGLRFFLPFYLTLLTLQDLHNLTHLELCYSKSLVNIPNLSQAPNLLRLDLKGCVKLVRLHPSIGCLKNLGYLNLENCRSLVSIPNNIFDLNSLYNLNLSGCWKLLKDQLLEQPRQSKQLNTGQSVQRHMTSSICKTLTRPLHFFSSRWCPNSVGLLVPSLSRFPALESLDISFCNLVEIPDAIGQLCCLERLNIGGNNFVTLPHCIKELPKLRELNLQYCKKLKWFPSTLLPIGGGSHRRFYYGGLYVFNCPNLSDKKGCAVTVISWMIKMIQVNMQCSLPRCTIKVIIPENKIPRWFNKQNTGNSMKVDSSPIVDDNNWIGIACCVAFVVHDDDAPTEYPPILFGCGFRRNPDKAVCSIAPIRLKKDWITTELDHMLLMFLSRDVFINNFVSALKEGVSDLDGIELVALARYPEEVVEVKSCGYRWVSKEDLEHLNPEKMYSANSLAYNQKHKFLEIQDDQ 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00825 1092 SMART till_3 17 159 IPR000157 GO:0007165
Arst3g00825 1092 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Arst3g00825 1092 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Arst3g00825 1092 SUPERFAMILY "Winged helix" DNA-binding domain 425 529 IPR036390 -
Arst3g00825 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 736 IPR044974 GO:0006952
Arst3g00825 1092 Pfam C-JID domain 919 1063 IPR045344 -
Arst3g00825 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Arst3g00825 1092 Gene3D Ribonuclease Inhibitor 523 761 IPR032675 -
Arst3g00825 1092 Gene3D Ribonuclease Inhibitor 762 863 IPR032675 -
Arst3g00825 1092 PRINTS Disease resistance protein signature 220 235 - -
Arst3g00825 1092 PRINTS Disease resistance protein signature 389 403 - -
Arst3g00825 1092 PRINTS Disease resistance protein signature 837 853 - -
Arst3g00825 1092 PRINTS Disease resistance protein signature 296 310 - -
Arst3g00825 1092 Pfam NB-ARC domain 203 424 IPR002182 GO:0043531
Arst3g00825 1092 Gene3D - 354 438 IPR042197 -
Arst3g00825 1092 Gene3D - 11 184 IPR035897 -
Arst3g00825 1092 Pfam TIR domain 17 194 IPR000157 GO:0007165
Arst3g00825 1092 SUPERFAMILY L domain-like 551 858 - -
Arst3g00825 1092 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Arst3g00825 1092 Pfam Leucine rich repeat 794 850 IPR001611 GO:0005515
Arst3g00825 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Arst3g00825 1092 Gene3D - 185 349 IPR027417 -
Arst3g00825 1092 FunFam Disease resistance protein (TIR-NBS-LRR class) 356 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00825 Arst-Chr3 5970094 5973818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00825 18 845 WRKY Transcription Factor Family AT4G12020 30.440 2.08e-86 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00825 - - psat:127106907 1142.1