Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00819 ATGGCGACGTTGATCTTATATATTTTCTTTAGCATTGTTGGGTCACTGTTAAAAACACTGATTGATGAGAGAAGCAGAGTCCCAGAAGCATCAACAACAGAAACAGAAACAGAAGTGAGGAGGCAGATAAGAGATACTATTGTGATGGATCATATTGTAAGATTAATGGCTCATCAGAGAGAACATCAAACAAGGCTGCAATTCAATGGTGATTCTGCTGTTATAACTATGGGTAGGAAAGCTTTGAGGGTGTTGCCACCGGTTAAGAGCTTTGTTGTTGAAGATAAAAGCAGTGGATGCTCCCCACTTGAATGCTCTATTTGCATGGAAGTGTTCAAGGATGGGGAGTTGATTCAACCTCTTGGATTGTGTCCTCATCAGTTTCATTCTTCTTGTCTTTACTCTTGGCTTCATAGTGGAAAATCTACTTGCCCCCTTTGCCGTGTGGATTTAGCAACCACATAG 465 0.4108 MATLILYIFFSIVGSLLKTLIDERSRVPEASTTETETEVRRQIRDTIVMDHIVRLMAHQREHQTRLQFNGDSAVITMGRKALRVLPPVKSFVVEDKSSGCSPLECSICMEVFKDGELIQPLGLCPHQFHSSCLYSWLHSGKSTCPLCRVDLATT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00819 154 CDD RING-H2 105 148 - -
Arst3g00819 154 Pfam Ring finger domain 104 148 IPR001841 -
Arst3g00819 154 SMART ring_2 105 147 IPR001841 -
Arst3g00819 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 153 IPR013083 -
Arst3g00819 154 ProSiteProfiles Zinc finger RING-type profile. 105 148 IPR001841 -
Arst3g00819 154 PANTHER RING FINGER DOMAIN-CONTAINING 6 151 - -
Arst3g00819 154 SUPERFAMILY RING/U-box 104 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00819 Arst-Chr3 5864946 5865410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00819 65 148 C3H Transcription Factor Family AT2G17450 40.659 1.52e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00819 - K10664 aip:107632256 297.745