Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00807 ATGGGCAGAGTAATCTCTTTCCTCGTTCAGCCGCGATTCGTCCTTTTATACCTTGTGCTTTCAATCTTCATCATTTTCGCGCTCTACGGCTCTAAACAAGACGAGGTGATGATATTAGAAGAGGATCCTGAAATTACACACAGGGTTTTTTTGGATATTGATATTGATAAACAGCGCTTAGGTAGGATCGTGATTGGATTATATGGCCATGTTGTACCAAAAACTGTTGAAAATTTCAGAGCTTTGTGCACAGGGGAGAAAGGCAAGAGTTCTAGTGGCGTAAAACTTCACTACAAAGGAACACCACTTCATCGGATAATATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCGTGATGGCAAAGGATCTGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAAAACTCTCATGCTGGTGTTGTTGCTATGGCAAATTCAGGACCTGATTCAAATGGCTCCCAGTTTTTTATTACCACAGTGAAGGCCTATTGGTTGGATGGTGAGCATGTTGTCTTTGGAAAGGTTATTCAAGGCATGGATAATGTGTTTGCGATCGAAGGGGGAGCTGGAACGTATAGCGGAAAACCCAGAAAGAAGGTGGTAATTGCAGATTGTGGAGAGATACCCAAGAGCCAGTGGGATGAGGAAATTTCAACTTCCAAATCAGTGACAACAACATAA 702 0.4174 MGRVISFLVQPRFVLLYLVLSIFIIFALYGSKQDEVMILEEDPEITHRVFLDIDIDKQRLGRIVIGLYGHVVPKTVENFRALCTGEKGKSSSGVKLHYKGTPLHRIISGFVIQGGDIVHRDGKGSESIYGGTFPDENFKIKNSHAGVVAMANSGPDSNGSQFFITTVKAYWLDGEHVVFGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADCGEIPKSQWDEEISTSKSVTTT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00807 233 Gene3D - 38 221 IPR029000 -
Arst3g00807 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 53 213 IPR002130 GO:0000413|GO:0003755
Arst3g00807 233 FunFam Peptidyl-prolyl cis-trans isomerase 35 221 - -
Arst3g00807 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 48 215 - -
Arst3g00807 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Arst3g00807 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Arst3g00807 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Arst3g00807 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 82 IPR002130 GO:0000413|GO:0003755
Arst3g00807 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Arst3g00807 233 SUPERFAMILY Cyclophilin-like 43 215 IPR029000 -
Arst3g00807 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 50 214 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00807 Arst-Chr3 5782175 5785472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00807 61 209 U-box Gene Family AT5G67530 42.000 2.46e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00807 - - gmx:100800775 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00807 3 5782175 5785472 Arst3g00807 3 5782175 5785472 ECH