Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00770 ATGGGTTTCCGCATTCCAAGTATTAGAAGGGCAGCAAAAACAATTTCCAAGGGTCTTGAAGTACCAAAAGGTTACCTTGCAGTCTATGTTGGAGACAACATGAGGCGATTCGTGATTCCGATATCATACTTGAACCAACCTTTATTTCAAGAATTGTTGAGTCAAGTTGAAGAAGAATATGGATATGATCATCCAATGGGTGGTCTTACAATCCCATATAAAGCTCTTGCTTTTTCTTACATACATAGAAAGATGGGTTTCCGTTTTCCTGTCATCCGAAAGGCATCATTCTCTGCTAGGCAAGCAGCTTCAAAATCTGTAGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTCGGAGAGAACCAGAAGCGTTTTGTGATTCCCATTTCATATTTGAACCAACCTGCATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTCACAATTCCCTGCAGTGAACATGTCTTCCAGTTAATCACATCTCGCTTGAATTGA 525 0.4133 MGFRIPSIRRAAKTISKGLEVPKGYLAVYVGDNMRRFVIPISYLNQPLFQELLSQVEEEYGYDHPMGGLTIPYKALAFSYIHRKMGFRFPVIRKASFSARQAASKSVEVPKGYLAVYVGENQKRFVIPISYLNQPAFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQLITSRLN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00770 174 Pfam Auxin responsive protein 16 82 IPR003676 GO:0009733
Arst3g00770 174 Pfam Auxin responsive protein 96 172 IPR003676 GO:0009733
Arst3g00770 174 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 102 173 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00770 Arst-Chr3 5503301 5506561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00770 20 81 Calmodulin-binding Proteins AT3G43120 56.452 6.30e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00770 - K14488 vvo:131602130 239.195