Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00752 ATGAGCACTTCACAGGGTGCTATTACATGCAAAGTGTGCTGGGGATTAGGAATGACAGTAAAGCTTGAAGAGATTCAAGTTGATCCGCCGAAATCAGGCGAAGTTCGAGTCAAGATGCTTTGTGCTAGCATCTGCCACACTGATGTTTCAGGCATTCAAGGATCTCCATATGTTAATGGTTTCCCTCTAGTACCTGGACATGAAGGAGTTGGTGTTGTAGAGACAGTTGGAGATGAAGTGAAAAATCTTAAAGAAGGGGATATGGTGATTCCAACATATATAGGAGAGTGTGGGCATTGCCGGAATTGTGTTTCTGGAAAGACCAACCTTTGCCTGACATATCCTTTCAGAATTACTGGCTTCATGCCAGATAACACTTCTAGAATGTCCTGCAGAGGCAAGAAGTTACAACACACTTGGACTTGTGCCACGTGGTCCGAGTACACGGTTGTCAATGCCAATTACCTTCTCAAGGTTGATCCAGGCATCAATCTAGCCCATGCTAGCTTCATCTCATGTGGGTTTTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCCAAGTTGAAAGTGGATCAAGTGTTGCTGTTTTTGGTCTTGGTGCTGTAGGATTAGGGGCTATAAGCGGAGCGAAAATGCTGGGGGCTACTAAGATAATAGGGGTTGACACAAATGAGATGAAGAGAGAAAAAGGGAAAGCTTTTGGAATGACTGATTTTATAAATCCTCAAGATTCTGATAAACCTCCATCAGAATTGGTGAAGGAACTGAGTGATGGATTTGGTGTGGATTTTTCTTTTGAGTGCACTGGAGTTCCATCTTTGATTAGTGAATCCTTAGCAGCCACAAATATGGGAACCGGTAAAGCAATAACTATTGGCGCGCCAAATGAACCTATTGTGCCTTTCAATCATACAGCAATTCTGGCTGGCAGAACTCTGAAGGGTTCTGTTTTTGGAGGTCTAAAAACCATGTCAGACCTTTCAATTGTAGCTGACAAATGCCAAAAGGAGGAGTTCCCTCTTCAGGAGCTATTCACCCATGAGGTCCCATTGACAGATATAAGCAAAGCATTTGATCTACTCAAAGAGCCAAATTGTGTCAAAGTTGTCATCAAGATATGA 1122 0.4323 MSTSQGAITCKVCWGLGMTVKLEEIQVDPPKSGEVRVKMLCASICHTDVSGIQGSPYVNGFPLVPGHEGVGVVETVGDEVKNLKEGDMVIPTYIGECGHCRNCVSGKTNLCLTYPFRITGFMPDNTSRMSCRGKKLQHTWTCATWSEYTVVNANYLLKVDPGINLAHASFISCGFSTGYGAAWKEAQVESGSSVAVFGLGAVGLGAISGAKMLGATKIIGVDTNEMKREKGKAFGMTDFINPQDSDKPPSELVKELSDGFGVDFSFECTGVPSLISESLAATNMGTGKAITIGAPNEPIVPFNHTAILAGRTLKGSVFGGLKTMSDLSIVADKCQKEEFPLQELFTHEVPLTDISKAFDLLKEPNCVKVVIKI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00752 373 CDD liver_alcohol_DH_like 8 372 - -
Arst3g00752 373 FunFam S-(hydroxymethyl)glutathione dehydrogenase 178 316 - -
Arst3g00752 373 SUPERFAMILY GroES-like 9 197 IPR011032 -
Arst3g00752 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Arst3g00752 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 334 IPR036291 -
Arst3g00752 373 Gene3D - 12 368 - -
Arst3g00752 373 SMART PKS_ER_names_mod 17 371 IPR020843 GO:0016491
Arst3g00752 373 PANTHER ALCOHOL DEHYDROGENASE 8 365 - -
Arst3g00752 373 Gene3D - 178 316 - -
Arst3g00752 373 FunFam alcohol dehydrogenase 1-like isoform X1 16 177 - -
Arst3g00752 373 Pfam Zinc-binding dehydrogenase 201 325 IPR013149 -
Arst3g00752 373 Pfam Alcohol dehydrogenase GroES-like domain 33 159 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00752 Arst-Chr3 5380908 5383028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00752 34 299 Monolignol Biosynthesis Gene Families AT4G37980 29.478 1.51e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00752 K00121 - gmx:100798341 547.354