Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00738 ATGGGGTTTAGAAAATCAAACAAGATTTCACAAAGTGCGGTCTTGAAGCAAATATTGAAGAGGTGTTCGAGCTTAGGGAAGAAGAATAGTCATAATAATGGATATGAAAATAATAACAACGATCCTTTTCCTCTTGATGTTCCAAAAGGGCACTTTGCTGTTTATGTTGGTGAGAATAGAAGAAGGTACATTGTTCCGATTTCATTGTTGGGTAATCCGGAATTTCAATGCCTTCTTCGTCAAGCCGAAGAAGAATTCGGGTTTGAACATGACATGGGTCTCACTATTCCTTGCGAAGAAGTTGTTTTTCTCCGCTCCTTAACTACTTCAAGTTGA 336 0.3839 MGFRKSNKISQSAVLKQILKRCSSLGKKNSHNNGYENNNNDPFPLDVPKGHFAVYVGENRRRYIVPISLLGNPEFQCLLRQAEEEFGFEHDMGLTIPCEEVVFLRSLTTSS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00738 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 105 IPR003676 GO:0009733
Arst3g00738 111 Pfam Auxin responsive protein 20 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00738 Arst-Chr3 5323844 5324911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00738 5 103 Calmodulin-binding Proteins AT4G34750 46.465 8.44e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00738 K14488 - rcu:107260773 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00738 3 5323844 5324911 Arst3g00738 3 5323844 5324911 ECH
Arst3g00738 3 5323844 5324911 Arst5g01137 5 11598902 11599483 ECH
Arst5g01137 5 11598902 11599483 Arst3g00738 3 5323844 5324911 PCT