Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00694 ATGGAAGGGCAAGAAGCATTGAAAGGTACTAGTAGTTTTTCTTCAAAGTGTTCAGACTGTGGGAACCAAGCAAAGAAAGATTGCTCATACACAAGGTGCAGAACTTGCTGCAAGAACAAAGGATTTCACTGCCCAACCCATGTTAGAAGCACTTGGATCCCTGTCGATAGAAGACGCCATAAATCATCCTCATCATCATCACTAGTACTCATGGATCATCATCACTCTTCTCTCACTACAAATCTACACTTCCTTCATCATCAACATATCCCTAAAAGGCACAAGCACACCCCATATTCATCATCAGAGGAGTTTCCAGCAAGTATGAGTTCGGTGGCAATATTCAGGTGCGTTAGGGTGCGTTCGATGGATGAAAGTGTTAATGAAATTGCGTACCAAACATCTGTCAACATTGGAGGACATGTTTTCAGTGGTCTTCTTTATGATCAAGGCCCTCATCAACCACCACCATCAACCTCCATAGACCCTCACCTACACAGTAATACTAATAATCTCAATCTTATGATGATGAGTAATAGTAGTAATAATAATGTTCCAACCATTATTGATGCTCCTCCTCTTCCTCACGATCAGCCTTTTCTATCTTCTTCTACTTCTTTTGTTAGGCCTCCTACTATGCCATATTATTTTTCACACCCTCCTAAACCTTGA 672 0.4107 MEGQEALKGTSSFSSKCSDCGNQAKKDCSYTRCRTCCKNKGFHCPTHVRSTWIPVDRRRHKSSSSSSLVLMDHHHSSLTTNLHFLHHQHIPKRHKHTPYSSSEEFPASMSSVAIFRCVRVRSMDESVNEIAYQTSVNIGGHVFSGLLYDQGPHQPPPSTSIDPHLHSNTNNLNLMMMSNSSNNNVPTIIDAPPLPHDQPFLSSSTSFVRPPTMPYYFSHPPKP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00694 223 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 184 IPR007818 GO:0003700|GO:0006355
Arst3g00694 223 NCBIfam putative zinc finger domain, LRP1 type 16 58 IPR006510 -
Arst3g00694 223 MobiDBLite consensus disorder prediction 1 25 - -
Arst3g00694 223 Pfam Domain of unknown function (DUF702) 15 153 - -
Arst3g00694 223 NCBIfam LRP1 C-terminal domain 105 152 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00694 Arst-Chr3 4891656 4893121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00694 16 192 C2H2 Transcription Factor Family AT2G21400 42.708 5.06e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Arst3g00694 DUF702 1.7e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00694 - - aip:110269564 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00694 3 4891656 4893121 Arst3g00694 3 4891656 4893121 ECH
Arst3g00694 3 4891656 4893121 Arst5g01085 5 10786353 10788546 ECH
Arst8g00141 8 1565768 1568288 Arst3g00694 3 4891656 4893121 ECH