Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00693 ATGGATGACGCCAGGCCTACCTTCGTTTGGGGCACGAACATCAGCGTTGAGGACGTTAACGACGCGATTCAGAGGTTCCTGAGGGACTTTCGAGAAGCTTCTTCGTCACAGAATGATGATGACATGTTGCAGCACTTGCATACCGAAGGGAAGTACGAGAAGCTTATCAAACAGGTGATTGAAGTGGAGGGAGATTCCCTTGATGTTGATGCGCATGATGTGTTCGAACATGACCCTGATTTGTACACCAAGATGGTTAGGTACCCTCTCGAGGTTCTTGCGATCTTTGACTTGGTTCTTATGAATATGGTTAGCAGGATTAAGCCTATGTTCGAGAAGCACATTCAGACTCGGATTTTCAATCTCAAATCCTCCACTACAATGAGGAATTTGAATCCTACTGGTGAGTTTTGAATGTCTTTGCTCATTGCTACTGAAAAATCCGTGTCAGATTAAGGAATTTTACTGATTATACGGTGTAGCTCAATCATACCGGAAATTAGGGAAGCTATATTTAGGTGTCTTGTGTGTGGGAACTGCACCGACCCTGTTGCTGTAGAGAGAGGACGTATAACCGAGCCAACTATATGCTTGAGAGAAGAGTGTCAATCCAGGAACTCCATGACACTGCTTCACAACCGATGCAGGTTTACTGATAAGCAAATTGTGAGGCTCCAGGAGACACCTGATGAGATACCTGAAGGTGGAACTCCTCACACAGTGAGCTTGCTAATGCATGACAAGCTGGTAGATGCTGGAAAGCCTGGAGATAGAGTTGAGGTGACTGGTATATATAGAGCTATGAGTGTCAGAATTGGAGCAACTCAGCGAACTGTGAAATCATTGTTCAAGACGTATATTGATTGTCTTCACATAAAGAAGACTGATAAGTCAAGGATGCTGGTAGACGATGCTATGGACATTGACAATAGCGAGGGCAGAAATCCAGAAGAGGTTCACTTTGATGAAGAAAGGGTGGGTCAACTGAAAGAGCTCTCAAAACAGCCAGATATATATGAAAGATTGACAAAGTCATTGGCACCAAATATCTGGGAACTAGACGATGTGAAAAAAGGTCTTCTTTGTCAGCTTTTTGGTGGCAATGCTTTGAAGTTGGCATCTGGTGCTAGCTTCCGTGGTGATATCAATATTCTTCTTGTTGGTGATCCTGGTACTAGCAAGTCTCAGCTTCTTCAATACATTCACAAACTATCTCCTCGTGGCATTTACACTAGTGGAAGAGGGAGTTCTGCAGTTGGATTGACTGCTTACGTGACCAAGGACCCTGAAACAGGGGAAACTGTTCTTGAAAGTGGTGCCCTAGTTTTGAGTGACCGAGGTATTTGCTGTATAGATGAATTTGACAAAATGTCTGACAATGCAAGGAGCATGTTACATGAGGTGATGGAACAGCAAACTGTTTCTATAGCGAAGGCTGGTATTATTGCTTCTCTCAATGCTAGGACTTCCGTGTTGGCTTGTGCAAATCCAAGTGGGTCACGATATAATCCTCGCTTGTCTGTCATTGACAACATACACCTGCCTCCCACTCTTTTGTCCAGGTTCGATTTAATTTACTTAATTCTTGACAAGGCTGATGAACAGACTGACCGGCGACTTGCCAAACATATTGTTTCCTTACACTTCGAGAATCCCGAGAGCATGGAGCAAGATGTGATGGACATATCTACCTTGACTGATTATGTGAGCTATGCCCGAAAGCACATACACCCCCAGCTGTCTGATGAAGTTGCCGAAGAATTGACTAGAGGTTATGTGGATATAAGAAGAAGAGGAAACTTTCCTGGAAGTAGCAAAAAGGTGATAACAGCAACGCCAAGACAGCTTGAGAGTCTGATACGCCTTAGTGAAGCATTGGCCCGGATTCGCTTCGCAGAATGGGTTGAAAAGCGTGATGTAATGGAGGCATTTCGGCTTCTTGAAGTTGCAATGCAGCAATCTGCAACGGATCACGCTACTGGAACTATCGACATGGATCTTATTACTACTGGAGTTTCGGCAAGTGAAAGAATGAGACGAGAAGCTATGGTACAAGCAACCCGCAACATAATCATGGAGAAGATACAAATTGGGGGACCATCCATGCGATTATTGGAGCTATTGGAAGAGTTAAAACAGAGCACTGGCAGTGAAGTTCAAATTACTGATCTAAAGAATGCAGTTGCTACTCTCGCCAGTGAAGGATTCGTTACCATGCATGGTGAAAGCGTTAAAAGATCATGA 2244 0.4398 MDDARPTFVWGTNISVEDVNDAIQRFLRDFREASSSQNDDDMLQHLHTEGKYEKLIKQVIEVEGDSLDVDAHDVFEHDPDLYTKMVRYPLEVLAIFDLVLMNMVSRIKPMFEKHIQTRIFNLKSSTTMRNLNPTGEFXMSLLIATEKSVSDXGILLIIRCSSIIPEIREAIFRCLVCGNCTDPVAVERGRITEPTICLREECQSRNSMTLLHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRIGATQRTVKSLFKTYIDCLHIKKTDKSRMLVDDAMDIDNSEGRNPEEVHFDEERVGQLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESMEQDVMDISTLTDYVSYARKHIHPQLSDEVAEELTRGYVDIRRRGNFPGSSKKVITATPRQLESLIRLSEALARIRFAEWVEKRDVMEAFRLLEVAMQQSATDHATGTIDMDLITTGVSASERMRREAMVQATRNIIMEKIQIGGPSMRLLELLEELKQSTGSEVQITDLKNAVATLASEGFVTMHGESVKRS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00693 747 Pfam MCM N-terminal domain 22 118 IPR027925 -
Arst3g00693 747 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 22 710 IPR031327 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 Pfam MCM AAA-lid domain 564 650 IPR041562 -
Arst3g00693 747 Gene3D - 13 122 - -
Arst3g00693 747 SMART mcm 124 652 IPR031327 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 CDD MCM4 341 650 - -
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 379 394 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 467 480 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 491 503 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 439 453 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 518 526 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 FunFam DNA helicase 319 657 - -
Arst3g00693 747 Gene3D - 316 656 IPR027417 -
Arst3g00693 747 Gene3D - 156 278 IPR012340 -
Arst3g00693 747 Gene3D - 657 741 IPR036388 -
Arst3g00693 747 ProSiteProfiles MCM family domain profile. 338 544 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 Pfam MCM OB domain 157 268 IPR033762 -
Arst3g00693 747 SMART AAA_5 380 530 IPR003593 GO:0016887
Arst3g00693 747 Pfam MCM P-loop domain 327 548 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 161 174 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 212 224 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 500 517 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 652 661 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst3g00693 747 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 354 365 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst3g00693 747 FunFam DNA helicase 166 218 - -
Arst3g00693 747 ProSitePatterns MCM family signature. 447 455 IPR018525 GO:0003677|GO:0005524|GO:0006260
Arst3g00693 747 Gene3D - 166 218 - -
Arst3g00693 747 SUPERFAMILY Nucleic acid-binding proteins 46 289 IPR012340 -
Arst3g00693 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 665 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00693 Arst-Chr3 4872983 4878168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00693 6 746 Core DNA Replication Machinery Family AT2G16440 75.672 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00693 K02212 - gmx:100782586 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00693 3 4872983 4878168 Arst3g00693 3 4872983 4878168 ECH