Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00657 ATGTTCTTCGTTATACTTGCGCCTCTTCCTCAAAGTACCCCCTTTTCCCTTTCTCTTCTCCTCTCACCCGAATTCATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCTTCTAAACCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAGGGCTATAAGAGAGTTGATGGCTAGAGGTTCAGTTAGACTGGTTTCCGCTCACGCGAGTCAGCAGATTTACACTAGAGCAACAAACACCTAG 402 0.4701 MFFVILAPLPQSTPFSLSLLLSPEFMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSVRLVSAHASQQIYTRATNT 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00657 133 PANTHER 40S RIBOSOMAL PROTEIN S25 26 133 IPR004977 -
Arst3g00657 133 FunFam 40S ribosomal protein S25 46 133 - -
Arst3g00657 133 Gene3D - 46 133 - -
Arst3g00657 133 MobiDBLite consensus disorder prediction 27 62 - -
Arst3g00657 133 Pfam S25 ribosomal protein 32 130 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00657 Arst-Chr3 4569633 4571414 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00657 26 132 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.589 8.49e-54 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00657 K02975 - gmx:100786842 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00657 3 4569633 4571414 Arst3g00657 3 4569633 4571414 ECH