Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00653 ATGAATATGATTATGGAAAAGAGAAGCTTTTCTGAGTTCATGTCAGAGCTAGTAGCTCTGGTTGATGAGGTTGCTTCATTTGCTATGAATCCTGAAGTTGAGATAGATGCTTTTACCGAGTTTGCCATGTTGGTTGAGAAATTGGCACCAATTTTCAGTGATTTGAGTGACAAAATCACAGTTATAGAAAACAAGCCATCCATCAGAAAATCTTTGGAATCGATTGAAACTTCGCTTAGCCGTGCTAAAGCTTTGAAAAAAAGTTCTAGCTTGAAAGACCCTAGCAAACATATTGAGGACACAACACATGATATTGGTCGATCACTAGGCCTATTGCTCCTTGAATTGTCCACAGATTTTAGAGAAAAGGTTGGTACATTGCAAAAACAGTTTATGAATGCAAGATTTGGTGGGAACATGAGCCTATCTTCAAGTCCAGTATCATTAGAGTTTGCAAATGATGTGTATGGTGGAGGGGAAATAGAAGAGGAAATAGTCAATGTTACTATAGAAGATGTTGTATTGCAACTTAAGAATGGTAATGATGAAGAATTTGCAGTTGCTCTTTGGAGACTAAAGGAGTTCATCAGGGATGAGAAGCTGGAAAGTTGTTTGGTTAATGAGGAAGCTGTTGTTGCTGTTCTGTTAAATAGACTGCGTTCGTGTAAGGCAGACAATAGACTTAACATCATTCAATTGTTACGAAATATGGCTTCGGGAAATGATGACACAAAGGAGAAGATGGCAGAAACCGAGTTTTTATCAGCAGTGGTGAAGTCTCTAACAAGAGATGCAGAAGAGAGGAGGGAAGCAGTGGGACTGCTGCTAGAACTCTCTGATCTTCCTGCAGTTCGACGGCAAATTGGAAGAATTCAGGGGTGCATTGTAATGTTAGTCTCTATCCTTAATGGAAGCGACCCCATTGCTTCGCAAGGTGCAGCCAAGTTGTTGGATATGTTGTCCAGTAATACTCAAAATGCACTTCACATGGCTGAGGCTGGTTACTTTAAGCCTCTAGTGCAGTATTTGAAGAAAGGCTCTGACATGAACAAGATCCTTATGGCAACAGCACTTTCTAGGTTGGTGCTAACAGATCACAGCAAACTTTCCCTCGGCGAAGATGGGGCAATCGAGCCCCTTGTCAACATGTTTCACACTGGCAAACTTGAGTCCAAGTTGTCTGCTCTAAATGCCCTGCAAAATCTTTCCAGTGTGACAGAAAATGTGCAACTTCTAATCAGGTCTGGGATTGCAGGATCATTGCTGCAGCTTCTTTTTTCAGTAACATCTGTGCTAATGACTCTTAGGGAGCCAGCATCTGCTATTCTTGCAAGAATTGCTCAGTCGGAATCTATTATTGTTAATCAGGATGTTGCTCAGCAGATGCTCTCACTCTTGAACCTTTCCAGCCCAATAATTCAAGGCCATCTCTTGGAAGCTCTAAGTAGCATCGCTGCGCATCCTCGCGCATCTAAAGTGAGAAGAAAAATGAAAGAAAAAGGAGCACTTCAGCTAATTTTGCCTTTTCTGAAGGAAACTAACACTACAACAAGAAGCAAGGCCCTTAATTTGCTCTATACTCTTTCCAAAGATCTTACAGATGAGTTGAGTGAACATCTTGATGAAGCTCATCTTATTCACATTGTTAATATTGTCTCATCATCATCATCAGATAGTGAAAAGGCTGCAGCTCTTGGCATACTGAGTAATCTTCCAGTTAGTGATAAAAAGGTGACTGATATTCTGAAGAAAGCAAATTTGTTGTCTATTTTAATATCCAATATGGCTTCGAGCACTGGAAGTAACTCGCCTGTGACAAGAACCTTAGCTGAAATTGTTGCTTGTGTTATAGTTAGGTTCACAAATCCTTCTGACAAGAAACTGCAGCTCTATTCAGCTGAACAAGGGGTGATTCCTTTGCTTGTGAAACTTCTCTCAAGTGGTTCATCAATTGCAAAATTCAGAGCTGCGACCGCTTTGGCTCAGCTATCACAAAATTCTCTGTCCCTCAGGAGGAGTAGGAAGTCAAAGTGGTTTTGTGTAAATCCATCAGTAGAAGCATATTGTGAAGTGCATGATGGTTATTGCTATGTGAACTCCACATTTTGTCTGGTCAAGGCTGGTGCTGTTCCGGCACTTATCAAAATACTTGAAGATAAGGAGTGGGAAGCAGTTGAGGCTGCTTTGATTGCCCTTTCAACTCTTTTGCAAGACGAAATCTGTGAAGGCGGCATCAATTGGATAGCCAAGAATTCAGGTGTGCAAGCTATTATCAAAATTTTAGAAGCAGGTGATGTGAAGGTTCAAGAAAAAGCACTATGGATGTTGGACAGAATATTCAGGATTGAAGAGCACAGAGTAAAATATGGAGAATCAGCTCAGGTTTTTCTTATTGATTTGGCGCAGACGTGTGATTCTCGATTGAAGTCAACTGTTGCAAAAGTTTTGGCAGAGTTGGAGCTCCTGCAAGTTCAATCAAGTTATTTCTGA 2490 0.4084 MNMIMEKRSFSEFMSELVALVDEVASFAMNPEVEIDAFTEFAMLVEKLAPIFSDLSDKITVIENKPSIRKSLESIETSLSRAKALKKSSSLKDPSKHIEDTTHDIGRSLGLLLLELSTDFREKVGTLQKQFMNARFGGNMSLSSSPVSLEFANDVYGGGEIEEEIVNVTIEDVVLQLKNGNDEEFAVALWRLKEFIRDEKLESCLVNEEAVVAVLLNRLRSCKADNRLNIIQLLRNMASGNDDTKEKMAETEFLSAVVKSLTRDAEERREAVGLLLELSDLPAVRRQIGRIQGCIVMLVSILNGSDPIASQGAAKLLDMLSSNTQNALHMAEAGYFKPLVQYLKKGSDMNKILMATALSRLVLTDHSKLSLGEDGAIEPLVNMFHTGKLESKLSALNALQNLSSVTENVQLLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESIIVNQDVAQQMLSLLNLSSPIIQGHLLEALSSIAAHPRASKVRRKMKEKGALQLILPFLKETNTTTRSKALNLLYTLSKDLTDELSEHLDEAHLIHIVNIVSSSSSDSEKAAALGILSNLPVSDKKVTDILKKANLLSILISNMASSTGSNSPVTRTLAEIVACVIVRFTNPSDKKLQLYSAEQGVIPLLVKLLSSGSSIAKFRAATALAQLSQNSLSLRRSRKSKWFCVNPSVEAYCEVHDGYCYVNSTFCLVKAGAVPALIKILEDKEWEAVEAALIALSTLLQDEICEGGINWIAKNSGVQAIIKILEAGDVKVQEKALWMLDRIFRIEEHRVKYGESAQVFLIDLAQTCDSRLKSTVAKVLAELELLQVQSSYF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00653 829 SUPERFAMILY ARM repeat 266 666 IPR016024 -
Arst3g00653 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 174 829 - -
Arst3g00653 829 SUPERFAMILY ARM repeat 629 819 IPR016024 -
Arst3g00653 829 Gene3D - 692 826 IPR011989 -
Arst3g00653 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 417 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 741 781 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 364 404 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 697 737 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 490 530 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 323 363 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 625 665 IPR000225 GO:0005515
Arst3g00653 829 SMART arm_5 241 280 IPR000225 GO:0005515
Arst3g00653 829 Gene3D - 265 677 IPR011989 -
Arst3g00653 829 Gene3D - 160 264 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00653 Arst-Chr3 4544877 4548153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00653 180 829 U-box Gene Family AT1G76390 28.777 2.48e-50 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00653 K08332 - gmx:100791453 1098.57