Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00633 ATGGCTGCCGCAGATGTTGAGTTCCGGTGCTTCGTTGGTGGGCTTGCATGGGCCACCGATAACGATGCTCTAGAGAAGGCCTTCTCTGCCTACGGAGAAATCGTTGAATCGAAGGTTATCAACGATCGCGAAACTGGAAGATCCAGAGGTTTTGGATTTGTGACCTTTGCTAATGAGCAATCCATGAGGGATGCGATTGATGGCATGAACGGCTCCAACCTTGACGGCCGTAACATCACTGTCAACGAGGCTCAGTCCCGTGGAGGTGGCGGAGGTGGTGGAGGTGGCTTCAGAAGCGGAGGCGGCGGTGGATATGGTGGTGGCGGATTTAGCCGCGGCGGCGGTGGTGGTGGATACGGAGGCGGGGGCCGTCGTGAAGGTGGATACAACAGAAATGGTGGTGGCGGCGGTGGCTACGGATGGAGGAACTGA 432 0.5718 MAAADVEFRCFVGGLAWATDNDALEKAFSAYGEIVESKVINDRETGRSRGFGFVTFANEQSMRDAIDGMNGSNLDGRNITVNEAQSRGGGGGGGGGFRSGGGGGYGGGGFSRGGGGGGYGGGGRREGGYNRNGGGGGGYGWRN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00633 143 MobiDBLite consensus disorder prediction 82 106 - -
Arst3g00633 143 MobiDBLite consensus disorder prediction 121 143 - -
Arst3g00633 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Arst3g00633 143 FunFam Glycine-rich RNA-binding protein GRP1A 2 113 - -
Arst3g00633 143 Gene3D - 2 106 IPR012677 -
Arst3g00633 143 CDD RRM2_NsCP33_like 9 84 - -
Arst3g00633 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Arst3g00633 143 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Arst3g00633 143 PANTHER GEO13361P1-RELATED 4 140 - -
Arst3g00633 143 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00633 Arst-Chr3 4393051 4394119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00633 10 88 Eukaryotic Initiation Factors Gene Family AT4G34110 37.975 4.20e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00633 - K13195 ccaj:109800369 160.614