Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00629 ATGCTATTTTTATGTCAAAAATGCAGCCTTTACCTTCTTCCATGCTCCTTTGTACCATTCAAATCAAAGTCCATCTGCAACCAAACTTCAACTTCCACCATTCTCAACTGCCATAACCCACATTCCCAAGATGCCCCAGATGAACATCATCAGAGCCCCGTTCACCGCAAACACAATTCCAAATCCACAAACTTTCTCCTTCAGAACCTTTCCCAGAACAACCAGAATCAGCAGCAACTCACTGCTCCCCAAAAGATTGAACTTGAAGAACACCCCATCATGCCCCACCAAGAAAAGGTGAAACTTTTGGAACTTTCCCTTGTTAGGAAGAGGACCCCTCAGTTCCCTGGTTCCATCTATGTTCAGTCCCCAAGTGACTCTGATGTGGGTTCTTCTCTTCCACCTATAAGAAACCTTTTTCAATCAAGTGTTGACAATGATGGTGGTGGCCATGTTGATGAAGAAGAGGAGGAGATGATAATGCGTGCAGTTGAGATTCGTAGGAAGGTGACTTTGGAGATTTTCAAAGAAGCCATGATGAAGGAGGGTAGGTTTGGAATCACTTACACTACTAACTTGGCTAATAGGCTGCAAGGTTTCCTTGACTATGTTATGATTGAAGCTGCTAGCTTGAAGAGGATGCCAGAATATTCTAACTCTAGTTTCAATTTGCGCGCCAAAACCGTCATTGAGGACTCCCAGGTTGTGCCACTTATCAGATGGTTGAAGCATAATGAACTATCATATCCTCAGATATCAAAGCTCATTTTATTGTCAAGAGGAAGAATTGATTTGATAAGGGACCGTGTCCAGTGGTTGAAGTCGATTCATGTGAAAGGGGAGTTCCTTGGGGTTGCGCTTGTTAAGGGTGGTGAGAATATTTTGCACCGCAGCTATAAGGAACTTGATGAGATTGTTGAGTATCTGGTGTCCAATGGAGTTAGGAGAGACTGGGTGGGTTATGTCATTAGTCGATGTCCTCAATTGTTGTCGTACAGCTTAGAAGAAGTGAAGACTCGTGTGGCGTTCTATGTCGATATGGGTATGAATGAGAAGGATTTTGGTACAATGGTTTTTGATTTCCCCAGAGCACTTGGTCACTTAACTATGGAAGAAATGAACCAAAAGGTTAATTACTTGAAAGAATTTGGGCTTAAAAATGAGGATGTTGGCAAGTTGCTAGCATTTAGGCCACAATTGATGGGTTGTAGCATTGAAGAACAGTGGAAACCTCTTGTTAAGTATTTCTACTATTATGGAATCACTAAAGATGGCATGAGGAGAATGCTTACCCTTAAACCAATGGTCTTTTGTACCGATTTGAAGTTGAATATTGTTCCAAAGGTAAAATTTTTTCAGGACATAGGGGTTAGAGATGATGCAATTGGCAACATGCTTGTGAAGTTTCCTACTCTACTCACTTACAGCCTCAACAAGAAGATTAGGCCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTAACTGAGAAAGATATTGCCAAGCTAGGTGAGATGGTTGCCGATTTCCCATTGCTGCTCAGATACAATCCCGATGTCCTTCGGCCTAAGTATGTTTATCTGCGGCGAACCATGATCCGACCTTTGCAAGATATCATCGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAAGGGCGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGCTTAATATTAAGCTGAGATACATGCTGGCTAGCAGTGATGTACAATTCAAGAAACTGGTCAATGATCTCATCAGAAAGCGCAACAAGTTTCAGTCTGGTGTTGCTGGCGAAGAGGAGGAAGAGACTCAATCCGAGGCTGTTATTCCAGGGGATACTGCTACTAAACTCCAATCATAA 1869 0.4227 MLFLCQKCSLYLLPCSFVPFKSKSICNQTSTSTILNCHNPHSQDAPDEHHQSPVHRKHNSKSTNFLLQNLSQNNQNQQQLTAPQKIELEEHPIMPHQEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPIRNLFQSSVDNDGGGHVDEEEEEMIMRAVEIRRKVTLEIFKEAMMKEGRFGITYTTNLANRLQGFLDYVMIEAASLKRMPEYSNSSFNLRAKTVIEDSQVVPLIRWLKHNELSYPQISKLILLSRGRIDLIRDRVQWLKSIHVKGEFLGVALVKGGENILHRSYKELDEIVEYLVSNGVRRDWVGYVISRCPQLLSYSLEEVKTRVAFYVDMGMNEKDFGTMVFDFPRALGHLTMEEMNQKVNYLKEFGLKNEDVGKLLAFRPQLMGCSIEEQWKPLVKYFYYYGITKDGMRRMLTLKPMVFCTDLKLNIVPKVKFFQDIGVRDDAIGNMLVKFPTLLTYSLNKKIRPVVIFLMTKAGVTEKDIAKLGEMVADFPLLLRYNPDVLRPKYVYLRRTMIRPLQDIIEFPRFFSYSLEGRIIPRHKVLVENQLNIKLRYMLASSDVQFKKLVNDLIRKRNKFQSGVAGEEEEETQSEAVIPGDTATKLQS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00629 622 Gene3D Transcription termination factor 3, mitochondrial 226 364 IPR038538 -
Arst3g00629 622 Gene3D Transcription termination factor 3, mitochondrial 365 588 IPR038538 -
Arst3g00629 622 Pfam mTERF 295 581 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 Pfam mTERF 259 380 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 PANTHER CGI-12 PROTEIN-RELATED 380 502 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 355 386 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 285 315 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 391 422 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 535 566 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 463 495 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 503 533 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Arst3g00629 622 MobiDBLite consensus disorder prediction 595 622 - -
Arst3g00629 622 MobiDBLite consensus disorder prediction 38 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00629 Arst-Chr3 4347945 4351156 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst3g00629 mTERF 1.7e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00629 K15031 - qsa:O6P43_001902 763.837