Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00622 ATGGCGGTTTCCGGTAACTCCTCCGGCGAACCTCTACCTGAATTGAACACAACATCATCGGTTCTAGGCGTGAAGCTCGTGGTTCTAGTTGCAATTATCTTCATTGCGATCGTGGTAACGATCTTGCTCATCTTCTTCCTCTGCTTCAGAAGAAGCAGAACCTCCTCTTGCAGAAACCACAGAACCCTCGGGAAACATAGCTCAGGAACAATCCCTCTGGTTTCAAAGGAGATCAACGTCGTCAAATCCCTAGATCTCGAACAACAACAGCAACAGCAACAGATTCTCGAAGACGTTGTTGTTGTTGATGATGATCTAAAGAAGAAGAAGAAGAAGGAGGAGGAGGAAGGTGAAGGCACCAAGAATAAAAAGAGTGAGGGAGAAGGGAGTGATGACGTGTCAATTTCCGGTGGGAGAAGGAGTGAGGCGTCGTCGATGTCGGTGGAGGATCCGAACATCGGGTGGGGGAGGTGGTATAGTCTGAAGGAGGTGGAGGTGGCGACACGTGGCTTCGCGGAGGAGAATGTCATTGGTGAAGGTGGCTATGGGATTGTATACAGAGGAGTTCTGCAAGATGGTTCTGTTGTTGCCGTCAAGAATCTTCTCAACAACAAGGGTCAAGCGGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTTGGGCTGGTAGGATATTGTGCAGAAGGTCCTAAAAGGATGCTTGTTTATGAATATGTTAACAATGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGACCAGTGAGCCCCTTGACATGGGATATTCGGATGAAGATTGCCATTGGCACTGCTAAAGGGCTAGCTTACTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGACAAAAACTGGAATGCCAAAGTATCCGATTTTGGACTTGCCAAGCTCTTAGGATCCGAGAAAACCCACGTGACTACGCGTGTAATGGGAACATTTGGATATGTGTCACCTGAATATGCAAGCACCGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTCGGAGTTCTTCTCATGGAGATAATTACAGGAAGATCCCCCATTGATTATTCTAGACCTCCTGGAGAGATGAATTTGGTTGATTGGTTCAAGGGAATGGTAGCAAATCGTCGTGGTGAAGAGTTAGTCGATCCTTTAATCGAGGTTCAGCCCTCTCAAAGATCCCTGAAGCGAATGTTACTCATTTGTCTTCGCTGTATTGATTTGGATGTTGTTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTTCCATTTCGTTCTGAAATTCGTACACTTAAAGAGAAAGACAATGTCCCTTCTGCTGCAGATGTTTCGAGTAAAAGAGTGCCATATGAATCAAAATATGCAGAGTCCATAGGAAAATCAAGATGGAAATAA 1470 0.4503 MAVSGNSSGEPLPELNTTSSVLGVKLVVLVAIIFIAIVVTILLIFFLCFRRSRTSSCRNHRTLGKHSSGTIPLVSKEINVVKSLDLEQQQQQQQILEDVVVVDDDLKKKKKKEEEEGEGTKNKKSEGEGSDDVSISGGRRSEASSMSVEDPNIGWGRWYSLKEVEVATRGFAEENVIGEGGYGIVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPKRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEELVDPLIEVQPSQRSLKRMLLICLRCIDLDVVKRPKMGQIVHMLEADDFPFRSEIRTLKEKDNVPSAADVSSKRVPYESKYAESIGKSRWK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00622 489 SMART serkin_6 171 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00622 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Arst3g00622 489 ProSiteProfiles Protein kinase domain profile. 171 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00622 489 ProSitePatterns Protein kinases ATP-binding region signature. 177 199 IPR017441 GO:0005524
Arst3g00622 489 Pfam Protein tyrosine and serine/threonine kinase 174 442 IPR001245 GO:0004672|GO:0006468
Arst3g00622 489 CDD STKc_IRAK 177 443 - -
Arst3g00622 489 MobiDBLite consensus disorder prediction 460 489 - -
Arst3g00622 489 Gene3D Phosphorylase Kinase; domain 1 138 246 - -
Arst3g00622 489 MobiDBLite consensus disorder prediction 110 135 - -
Arst3g00622 489 MobiDBLite consensus disorder prediction 110 148 - -
Arst3g00622 489 FunFam Putative receptor-like serine/threonine-protein kinase 247 457 - -
Arst3g00622 489 Gene3D Transferase(Phosphotransferase) domain 1 247 455 - -
Arst3g00622 489 FunFam Probable serine/threonine-protein kinase At1g01540 151 246 - -
Arst3g00622 489 SUPERFAMILY Protein kinase-like (PK-like) 146 443 IPR011009 -
Arst3g00622 489 PANTHER OS01G0323000 PROTEIN 14 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00622 Arst-Chr3 4316783 4320178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00622 139 443 Receptor kinase-like Gene Family AT4G02010 47.573 6.63e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Arst3g00622 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00622 - - gmx:100305442 656.366