Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00549 ATGATGAATACTTCAGCTGAGCAATCCTCCTTCTTCAAAGTCTTCCTTCCACAGTTTAGCTCTGAAAAATTGCTACTCCCAAAAGAGCATGTGGCATTGACAAGGATGAAAGAAAGGGTACCTGAGGAATTCATGCTGAGAAATGGAAGAGGAGGAGCATGGAGGGTGAAGACAAGTTGCATTGGTGAGAAGGTGTATTTTGATGATGGATGGAAGGAGTTTGTAAGGGATAATGGTATACAAGAAGCTTGTGTTATTATTGTTTTCAATCCAGATGGAAGCAGCACATTCGAGTTCAAGATCTTTGAATCATCAATGTGTGAAAAGACACAAACCTTGGAGGAGGCGGCGGCAGTGGAGATGGAGGAGTCATCAGAAGAAGAAGAAGAAGAAAATGATGATGATGAAGATTATGAGGATGAGGACGAGGATGAGGATGAGATGGATCATCATAGAGCTGGGAAAGCTCCTGCAAAAAGGAAAAGGGGAAATTACAATGATATTAAGGAGTATGGAGAAATTATTGCAACTTTTATTGATCAACACAATCCATACTTTGTTTTCAAAAGGAACAAATCCAGACCCAATGAACTGCATGTTCCATGTAAGCTCATTAAGGAGTACTCCATTACCATCCCAGAAACTATTAAATTATGTTGCAAGTATATCAAAGTGAACTCGCCGGAGAAAATTGTTGTTAAGAAACAAGCTTAG 714 0.3964 MMNTSAEQSSFFKVFLPQFSSEKLLLPKEHVALTRMKERVPEEFMLRNGRGGAWRVKTSCIGEKVYFDDGWKEFVRDNGIQEACVIIVFNPDGSSTFEFKIFESSMCEKTQTLEEAAAVEMEESSEEEEEENDDDEDYEDEDEDEDEMDHHRAGKAPAKRKRGNYNDIKEYGEIIATFIDQHNPYFVFKRNKSRPNELHVPCKLIKEYSITIPETIKLCCKYIKVNSPEKIVVKKQA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00549 237 CDD B3_DNA 10 102 IPR003340 GO:0003677
Arst3g00549 237 Coils Coil 121 141 - -
Arst3g00549 237 ProSiteProfiles B3 DNA-binding domain profile. 9 105 IPR003340 GO:0003677
Arst3g00549 237 MobiDBLite consensus disorder prediction 119 147 - -
Arst3g00549 237 SMART B3_2 11 105 IPR003340 GO:0003677
Arst3g00549 237 PANTHER B3 DOMAIN-CONTAINING 6 159 - -
Arst3g00549 237 Pfam B3 DNA binding domain 11 104 IPR003340 GO:0003677
Arst3g00549 237 SUPERFAMILY DNA-binding pseudobarrel domain 6 107 IPR015300 -
Arst3g00549 237 Gene3D - 2 107 IPR015300 -
Arst3g00549 237 MobiDBLite consensus disorder prediction 114 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00549 11 164 B3 DNA Binding Superfamily AT3G06160 28.571 3.09e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g00549 B3 1.4e-12 CL0405