Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00547 ATGCCTCGCCCTTCTTTCCATAAGGTTATTCTAACCACCACTCTTCAATCCAAGCAACTGAGAGTACCAGATAATTTTCTGAGAAAATATGGGGGTGAGCTTTCCTCCTTTGTTAACCTGTCTGTTCCCGATGGTAGTTCGTGGCGCGTGGGACTGAAAAAGGTAGACAACAAATTTTGGTTCATTGATGGTTGGGCAGAATTTGTTCAGCGCTATTCCATCGGTGTTGGATACCTTTTAGCTTTCAGATACGAAGGAAAGTCGAATTTCAGTGTTCACATTTTTAATTTGGCTACTGCTGAGATAAATTATCAATCACCCACACGAAGCAGCAATGAAGGATCTTACTTTGCAAATCGCCTCAAAATTTTTGAAGAAATGGAAGATGAAGACTTCACTGAATCCAAACCAGCCTTGCAGAATCTATTTAACGGGTCAAAACTTAATAGTGTAAACTGGGGTGAGGGCGGGAATGCTCTTCCTGCGAAAAGTGCTAGAGATATAGGTCTTCAGTTTAATGCAATTGAGTTTAAAAAATCTACTGATGAACTGAAATTGCGTGCTTCTTTCGAGGAAAAGGCCAAAAAAACTGCAAGAAAGAAGCGTAAATCTGAACCTGAAGGCCAGGAAGCTTCTGATGAACAAGAAGAGGAGAGAGAAATGCGCATTAGATTCTATGAAAGTGCTTCTGCAAGGAAAAGAACCGTGACGGCTGAGGAAAGAGAAAAGGCTGTCAACGAAGCGAAAGCATTTGAACCATCTAATCCTTTCTGCCGGGTTGTCCTGCGGCCCTCCTATCTATATAGGGGATGCATAATGTACTTGCCATCTTGCTTTGCAGAAAAGTATTTGAATGGTGTTTCGGGATTCATCAAACTTCAACACCCTGATGGGAGACAGTGGCCAGTTCGCTGCCTTTATCGAACGGGTAGGGCTAAGTTAAGCCAGGGATGGTTCGAATTTGCGATAGACAACAATCTAGGCGAAGGCGACGTCTGTGTGTTTGAGCTGCTTAGAATGAAGGAAGTAGTGCTGCAAGTTACTATATTTCGCGTCACCGACGAGGCAGAATTCTTGAGCCCTTCTTTGCTGCTTACCCAAAATGAGAACCAGGCCAAGCTGTTGAGAAGCCCCATGCAGCAGCATCTCCTTACATCACCTAAAAGTTAG 1170 0.435 MPRPSFHKVILTTTLQSKQLRVPDNFLRKYGGELSSFVNLSVPDGSSWRVGLKKVDNKFWFIDGWAEFVQRYSIGVGYLLAFRYEGKSNFSVHIFNLATAEINYQSPTRSSNEGSYFANRLKIFEEMEDEDFTESKPALQNLFNGSKLNSVNWGEGGNALPAKSARDIGLQFNAIEFKKSTDELKLRASFEEKAKKTARKKRKSEPEGQEASDEQEEEREMRIRFYESASARKRTVTAEEREKAVNEAKAFEPSNPFCRVVLRPSYLYRGCIMYLPSCFAEKYLNGVSGFIKLQHPDGRQWPVRCLYRTGRAKLSQGWFEFAIDNNLGEGDVCVFELLRMKEVVLQVTIFRVTDEAEFLSPSLLLTQNENQAKLLRSPMQQHLLTSPKS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00547 389 SMART B3_2 6 98 IPR003340 GO:0003677
Arst3g00547 389 SMART B3_2 258 353 IPR003340 GO:0003677
Arst3g00547 389 MobiDBLite consensus disorder prediction 195 219 - -
Arst3g00547 389 MobiDBLite consensus disorder prediction 201 219 - -
Arst3g00547 389 Gene3D - 235 355 IPR015300 -
Arst3g00547 389 CDD B3_DNA 4 96 IPR003340 GO:0003677
Arst3g00547 389 PANTHER B3 DOMAIN-CONTAINING 3 345 - -
Arst3g00547 389 ProSiteProfiles B3 DNA-binding domain profile. 258 353 IPR003340 GO:0003677
Arst3g00547 389 Pfam B3 DNA binding domain 261 352 IPR003340 GO:0003677
Arst3g00547 389 Pfam B3 DNA binding domain 14 95 IPR003340 GO:0003677
Arst3g00547 389 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Arst3g00547 389 Gene3D - 1 98 IPR015300 -
Arst3g00547 389 CDD B3_DNA 256 351 IPR003340 GO:0003677
Arst3g00547 389 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Arst3g00547 389 SUPERFAMILY DNA-binding pseudobarrel domain 251 352 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00547 Arst-Chr3 3813856 3816593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00547 1 357 B3 DNA Binding Superfamily AT3G18990 55.462 2.24e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g00547 B3 8.4e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00547 - - gmx:100813285 565.074