Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00545 ATGGTTGCGTTCTGTGTATGTAGCTATGGCCAAACCCAAGGTGCTGGAGGAGGAAGTGGAGGTGGTGGTGGTGGAGGAGCAACCCCGTCTCAGAAATTGACAACCAATGATGCCTTAACTTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAGAGAGAAAAATATGACTTGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAGAGGACTGACACTGCTGGTGTCATAGCAAGGGTTTTTTTCTATTCTTTGATATGGTTGGATGATATTATTGAAGATGTGGAGATTCAAAGTTCTAAGAATAGATTACTTGATTTGAAGGAGATAATTGTGAAGATTGGAGATGGATTGAAGAAATAA 363 0.4022 MVAFCVCSYGQTQGAGGGSGGGGGGGATPSQKLTTNDALTYLKEVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVFFYSLIWLDDIIEDVEIQSSKNRLLDLKEIIVKIGDGLKK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00545 120 Gene3D Paired amphipathic helix 37 84 IPR036600 GO:0006355
Arst3g00545 120 ProSiteProfiles PAH domain profile. 31 102 IPR003822 GO:0006355
Arst3g00545 120 Pfam Paired amphipathic helix repeat 54 80 IPR003822 GO:0006355
Arst3g00545 120 SUPERFAMILY PAH2 domain 29 81 IPR036600 GO:0006355
Arst3g00545 120 PANTHER SIN3B-RELATED 31 80 IPR039774 GO:0003714
Arst3g00545 120 FunFam Paired amphipathic helix protein Sin3 37 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00545 Arst-Chr3 3798100 3799199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00545 20 80 WRKY Transcription Factor Family AT4G12020 59.016 4.77e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst3g00545 PAH 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00545 K11644 - adu:110279622 214.157