Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst3g00536 | ATGACATCTAATATTACAACCTTCAACCTTGGATATGATATGCCAACAATGGCTGCTTCTCTCTCCTCTCTCCTTCTTCCACTAGGTTCTACTTGTAAAAGTTTGAGCTGCAATCCTCAAGGCATTGCGGCTGACAGGCTTCGATGCTTGGTTCCGCAATACCGAAGATCCGTGGTAAAAGCAAAGGCCTCATATACAACTGAATGTGCTGCTATGGTTAATACCAATTCACGCAGAGACTTTCTTGGATTGGCTTTGGGAATCTCAAGCCTCTTTGTTGGTTCATTGGAAGCCAAAGGAGCTGGTTTGCCCCCGGAAGATAAGCCGAAACTATGTGATGAAGCTTGTGAGAAGGAGCTTGAAAATGTGCCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGTCCTAGTCCCCCAGTTGGATTTCAGGTAGCAGCTAATTATGTAGCAATGGTTCCTTCCGGACAAGTATTTGATAGTTCATTGGAGAAAGGCCAGATTTACATTTTCCGTGTCGGTTCTGGTCAGCAGGTGATAAAGGGTCTTGATGAAGGTCTTCTGAGCATGAAAGTAGGAGGGAAGCGTCGACTGTACATACCTGGACCATTGGCATTCCCAAAAGGACTTACATCAGCTCCAGGGAGACCAAGGGTGGCTCCAAATAGTCCAGTCATATTTGATGTTAGTTTGGAATATATACCAGGGCTTGAAGTGGATGAGGAATAA | 747 | 0.4431 | MTSNITTFNLGYDMPTMAASLSSLLLPLGSTCKSLSCNPQGIAADRLRCLVPQYRRSVVKAKASYTTECAAMVNTNSRRDFLGLALGISSLFVGSLEAKGAGLPPEDKPKLCDEACEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQVFDSSLEKGQIYIFRVGSGQQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLEVDEE | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst3g00536 | 248 | SUPERFAMILY | FKBP-like | 113 | 237 | - | - | |
| Arst3g00536 | 248 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 101 | 241 | - | - | |
| Arst3g00536 | 248 | Gene3D | - | 120 | 239 | IPR046357 | GO:0003755 | |
| Arst3g00536 | 248 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 148 | 237 | IPR001179 | GO:0003755 | |
| Arst3g00536 | 248 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 148 | 241 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst3g00536 | Arst-Chr3 | 3747340 | 3750657 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst3g00536 | 129 | 237 | Calmodulin-binding Proteins | AT3G25230 | 36.364 | 4.14e-11 | 60.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst3g00536 | K01802 | - | gmx:100784939 | 355.91 |