Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00522 ATGATGACTAGCAGCTCTTTGAACTCAGATGATCCTTGTTTTGATGGTGATGGAAAATGGGCCACCAAGCTTCTTAGGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAGTTAGCTTCCCCTTATGGAGATTCTCAGCAGAAACTAGCCTCATATTTTCTTCAAGCTCTATTCTGCAAGGCCACTCAAACAGGCCAAAGATTTTACATGAATCTAAAATCAGCATCTGAAAAGAACCAATCTTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGGTGCAATCTTGGAAGCCTTTTTAGAAGCAGGAGGAGAGAAAAACAAAAAGAAAAAGCTTCACATCATTGACATAAGCAACAACACTAGCACACTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGAGTAGTGATCATGTTGAAACTCCTCAATTGAAGCTCACAATTGTGTTGGTGAAAGAGAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTTCCCTTTGAGATTAACATGATAAATGGTGTGGAACATTTATGGAAGGTAACAAAAGAAGAGTTAGGAATAGTAGTTGAAGAAGAAGATGATGATGATGATGATGATGATGATGCTTTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGGAGGGAGAAAGGGATAATGTGATTGGAATGTTGAAGTCTCTTAGTCCAAGAATTGTGACAACTGTTGAGGAAGAAAGTGGTGGTAGTGATGATTCTTGCATCACAAGAAATGATGATGATGACTTTGTAAAATGCTTTGAAGAGTGTTTATGGTTTTACAAGATTTACTTTGAGATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAAAAGTTAATGCTAGAGAGGGAGTGTTCAAGAAACATACTTGGTGATTTGGGTTGCAATAATGATAATAATAGTGATCATAATAAAAGGGAGAGGGGAGTAGAGTGGTCTATGAGGTTTAGGGAGTATTTTACTCCAATAGGTTTGAATGATGATGTTGTGGATGATGTTAGGGCATTGCTAAAGAGATATAATAGGTCAGGGTGGTCATTGATGTTGCCATCATCAAAAGTAGAAGGAATTTACTTGAAATGGAGGGATCAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1281 0.3825 MMTSSSLNSDDPCFDGDGKWATKLLRECARAINDRDSSKIQHLLWMLNELASPYGDSQQKLASYFLQALFCKATQTGQRFYMNLKSASEKNQSFDSARKMILKFQEVSPWTTFGHVASNGAILEAFLEAGGEKNKKKKLHIIDISNNTSTLCTQWPTFLESLATKSSDHVETPQLKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWKVTKEELGIVVEEEDDDDDDDDDAFIAVNCVGGLRRVEEGERDNVIGMLKSLSPRIVTTVEEESGGSDDSCITRNDDDDFVKCFEECLWFYKIYFEMLEESFPTISNEKLMLERECSRNILGDLGCNNDNNSDHNKRERGVEWSMRFREYFTPIGLNDDVVDDVRALLKRYNRSGWSLMLPSSKVEGIYLKWRDQPVLWASAWKP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00522 426 ProSiteProfiles GRAS family profile. 12 425 IPR005202 -
Arst3g00522 426 Pfam GRAS domain family 22 425 IPR005202 -
Arst3g00522 426 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 413 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00522 Arst-Chr3 3627691 3629012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00522 6 426 GRAS Transcription Factor Family AT4G37650 47.248 2.98e-123 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst3g00522 GRAS 6.5e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00522 - - adu:107477059 852.818