Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00509 ATGAAAATTCAGTGTGATGTGTGTGAGAAAGTTCCAGCAACAGTGATCTGTTGTGCAGATGAAGCAGCTCTGTGTGCAAAATGTGATGTGGAGGTTCATAGTGCTAACAAGCTTGCAAGCAAACACCAGAGGCTTCTCCTTCAATGTCTCTCTAACAAGCTTCCAAGATGTGATATTTGCCAAGATAAGCCAGCTTTCATATTCTGTGTCGAAGACAGAGCACTCTTCTGTAAGGATTGCGACGAACCAATTCATTTAGCTGGCAGCCTTTCTGCGAACCACCAGAGGTTTCTTGCTACTGGAATTCGGGTGGCTTTGGGTTCTAATGACTGCTCCAAAAGTGATGAGAAAAGCCACTTGGAACCATCTAATCCAGCTGCGCAACAAGTTCCAAGGAAAGTTCCTTCTCAGCAATCGCCTAGCTTCACTCCCCCTAGCTTTTGGGCAGTTGATCAACTATTGGATTTACCAGAGTTTGGATCACCAGAGAAAAAACAAGCAGACGAATTTGGAGAGTTGGAATGGTTAGCAGATGTTGGTATCTTTGGTGAACAGTTTCCTCAGGAAACATTAGCTGCAGCTGAAGTTCCTCAGCTTCCTGTGTCACACACTAGCACTCTTGCACCATACACTTTTAAAGCCACTAATAAATCTTACATGTCTAGCAAAAAGCCTAGGATCGAAGTCTTAGGTGAAATAGATGATGAGCATTTCACTGTGCCTGATCTAGGCTAA 735 0.4381 MKIQCDVCEKVPATVICCADEAALCAKCDVEVHSANKLASKHQRLLLQCLSNKLPRCDICQDKPAFIFCVEDRALFCKDCDEPIHLAGSLSANHQRFLATGIRVALGSNDCSKSDEKSHLEPSNPAAQQVPRKVPSQQSPSFTPPSFWAVDQLLDLPEFGSPEKKQADEFGELEWLADVGIFGEQFPQETLAAAEVPQLPVSHTSTLAPYTFKATNKSYMSSKKPRIEVLGEIDDEHFTVPDLG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00509 244 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Arst3g00509 244 CDD Bbox1_BBX-like 5 47 - -
Arst3g00509 244 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Arst3g00509 244 MobiDBLite consensus disorder prediction 113 141 - -
Arst3g00509 244 SMART bboxneu5 4 47 IPR000315 GO:0008270
Arst3g00509 244 SMART bboxneu5 52 99 IPR000315 GO:0008270
Arst3g00509 244 Gene3D Classic Zinc Finger 1 92 - -
Arst3g00509 244 Pfam B-box zinc finger 52 94 IPR000315 GO:0008270
Arst3g00509 244 MobiDBLite consensus disorder prediction 121 141 - -
Arst3g00509 244 CDD Bbox1_BBX-like 57 98 - -
Arst3g00509 244 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00509 Arst-Chr3 3498575 3501419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00509 1 164 Orphan Transcription Factor Family AT1G06040 66.071 5.36e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Arst3g00509 zf-B_box 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00509 - - gmx:100779183 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01528 8 24363277 24364849 Arst3g00509 3 3498575 3501419 PCT