LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g00495	ATGGGGTTCTCAGTGAGAGACTTGTTAATCTATGGTTTGAACATGCAACTGTGGTTATTTTTTCATGTGATGGTTCTATCATACTTGTGGTCACAAGTTACAAGTCTTGGATCCATGTCTTCCATTGCAATATCTTATGGAGAACAAGGTTCAGTCTTTTGTGGCTTGAAGCTTGATGGGTCCCATACTGTTACCTGTTATGGATCCAACACAGCCATAATCTATGAAACACCATCACATTTCTCATTCATTGGTCTAACTGCTGGTGATGGCTTTATATGTGGACTTTTAATGGATTCAAACCAACCCTATTGTTGGGGTAGCAGTGGCTACATTGAAATGGGGGTGCCTCAACCAATGATCAAGGAAGCTGAATACATAGACATCAGTGCTGGTGATCACCATGTATGTGGATTGAGGAAGCCATTAACTGGAAGATTCAGGAACACTTCATTTGTTGATTGTTGGGGTTACAACATGACTAGGAACTATGTGTTTGATGGAATGTTTCAGTCAATTTCAGCAGGTTCTGGATTCAACTGTGGCCTTTTCTCTCAGAATAGGAGTGTGTTCTGCTGGGGTGATGAGACTAGTAGCAGGGTCATTACTTTGATTCCAGATGACAAAAGATTCCAGAGAATCTCAGCTGGTGGATACCATGTTTGTGGAATATTGGAAGGTGTGAAGAATTCAAGAGCTGTTTGTTGGGGAAGAAGCTTGGATATAGAAGAAGAAATCTCAGTTTCAGTGAAACAACATGCTGGTAGTTATGGTCAAGGTAATGTTGATTTGGCACCAAGTGATCCAATGCTATCTGTTGTTGGAGGAAAGTTTCATGCATGTGGAATCAAGAGCTATGATAGGGAAGTGATTTGTTGGGGATTCATCATCAAACCAAGCACACCACCACCAAGTGGAACCAAGGTGTTTGAGATTGCTGGTGGTGATTACTTCTCTTGTGGTGTTCTTGCTGAAAGATCTCTTATGCCTGTTTGCTGGGGTGTTGGTTTTCCAAAAACACTACCTTTGGCTGTTTCACCAGGAATGTGCAAGTCAAATCCATGTCCTCCTGGATTCTATGAGATTGATCTCCAAAAGGGTCTTTGCAAGTCAACAGATTCAAGAATTTGCGTTCATTGCAGCAGTGGTGATTGTCCTTCTGAGATGTACCAGAAGAGTTCTTGTGGTGTGAATTCCGATAGAATATGTGAATATAATTGTTCTTCATGTTTTTCATCTAAGTGCTTATCAAATTGCTCATCTTCTAATTCTGAGAAGAAGAAAAATGATGATAAGTTTTGGGCTTTGCAGTTACCAGTTGTTATTGCTGAGATTGCTTTTGCAGTGTTCTTGGTTTGTATTGTGTCGTTGACTTCAGTTTTGTATGTTAGATACAAGCTGAGAGATTGTGAGTGTTCTTCAGTAAGGTCAAAGGTGAAGAAACTCAATGGTGGTTCTAACAGCAAGAGCAGGACAAATTTGGAGGAGTTCAAGATTAGGAGGGCTCAAATGTTCACCTATGAGGAGCTTGAAACTGCAACTAATGGATTTAAAGAAGAATCCATTGTTGGGAAAGGAAGCTTCTCTTGTGTGTTCAAGGGTGTTCTGAAAGATGGCACTGTTGTTGCTGTTAAGAGGGCCATAGTTTCCACAAACATGCAGAAGAATTCAAAGGAGTTTCACACAGAACTTGACTTGCTATCAAGGTTGAACCATGCACATTTGCTGAACCTATTAGGATATTGTGAAGAAGGAAACGAAAGGCTTCTTGTCTATGAGTTCATGGCCCATGGTTCCTTGCATCAACACCTTCATGGACCAAATAAGCTAGATTGGATAAGGAGAGTAACAATTGCAGTCCAAGCAGCAAGAGGAATTGAGTACTTGCATGGATATGCATGTCCACCAGTGATTCACAGAGACATAAAATCATCAAACATTCTTATTGATGAAGAACACAATGCAAGAGTTGCTGATTTTGGCTTGTCATTGTTAGGCCCTGCAGACAGTGGTTCACCACTTGCTGAATTACCAGCTGGTACTCTTGGTTATCTTGATCCAGAGTACTATCGGCTTCACTACCTCACTACAAAATCTGATGTATATAGCTTTGGTGTTCTGTTATTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATTGTTGAATGGGCAGTGCCGTTGATCAAGTCAGGTGACATAGCTGCAATATTAGACCCAGTTTTGAAACCTCCTAGTGATCTTGAGGCCTTGAAAAGGATTGCAAATGTGGCATGCAAATGTGTGAGGATGAGAGGGAAAGAAAGACCTTCAATGGACAAAGTAACAACAGCATTGGAAAGAGGGTTAGCAATGCTAATGGGAAGTCCTTGCATTGAGCAACCAATTTTGCCAACTGAGGTTGTTTTGGGAAGCAATAGGTTGCACAAGAAATCATCACAAAGATCATCAAATAGATCAGCTTCTGAGACCACTGAGGTAGCAGAAACTGAGGATCAAAGGATTGAGTTCAGGGCACCATCATGGATAACATTCCCAAGTGTTACATCTTCTCAGAGGAGGAAGTCTTCAGTGTCAGATGCTGATGTTGAAGGAGGGAAGAACAACAACAATAACATTAGTAATAATGCAGAAGTGAATAAGAATTTGGGAAATGTTGTTGGTGTTGGTGGTGATGGTTTGAAGAGTCTTGAGGAAGAGATTGGACCTGCTTCTCCTAGAGAGAGGTTATTCTTGCAACATAACTTCTAA	2769	0.4088	MGFSVRDLLIYGLNMQLWLFFHVMVLSYLWSQVTSLGSMSSIAISYGEQGSVFCGLKLDGSHTVTCYGSNTAIIYETPSHFSFIGLTAGDGFICGLLMDSNQPYCWGSSGYIEMGVPQPMIKEAEYIDISAGDHHVCGLRKPLTGRFRNTSFVDCWGYNMTRNYVFDGMFQSISAGSGFNCGLFSQNRSVFCWGDETSSRVITLIPDDKRFQRISAGGYHVCGILEGVKNSRAVCWGRSLDIEEEISVSVKQHAGSYGQGNVDLAPSDPMLSVVGGKFHACGIKSYDREVICWGFIIKPSTPPPSGTKVFEIAGGDYFSCGVLAERSLMPVCWGVGFPKTLPLAVSPGMCKSNPCPPGFYEIDLQKGLCKSTDSRICVHCSSGDCPSEMYQKSSCGVNSDRICEYNCSSCFSSKCLSNCSSSNSEKKKNDDKFWALQLPVVIAEIAFAVFLVCIVSLTSVLYVRYKLRDCECSSVRSKVKKLNGGSNSKSRTNLEEFKIRRAQMFTYEELETATNGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSTNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGNERLLVYEFMAHGSLHQHLHGPNKLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIAAILDPVLKPPSDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAMLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASETTEVAETEDQRIEFRAPSWITFPSVTSSQRRKSSVSDADVEGGKNNNNNISNNAEVNKNLGNVVGVGGDGLKSLEEEIGPASPRERLFLQHNF	922

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g00495	922	FunFam	Receptor protein kinase CRINKLY4	595	792	-	-
	Arst3g00495	922	MobiDBLite	consensus disorder prediction	814	839	-	-
	Arst3g00495	922	FunFam	serine/threonine-protein kinase-like protein CCR1	487	594	-	-
	Arst3g00495	922	Gene3D	-	76	346	IPR009091	-
	Arst3g00495	922	FunFam	Serine/threonine-protein kinase-like protein CR4	35	202	-	-
	Arst3g00495	922	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4	20	922	-	-
	Arst3g00495	922	MobiDBLite	consensus disorder prediction	814	830	-	-
	Arst3g00495	922	MobiDBLite	consensus disorder prediction	854	884	-	-
	Arst3g00495	922	Gene3D	Phosphorylase Kinase; domain 1	487	594	-	-
	Arst3g00495	922	ProSiteProfiles	Protein kinase domain profile.	517	792	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g00495	922	ProSiteProfiles	TNFR/NGFR family cysteine-rich region domain profile.	354	403	IPR001368	GO:0005515
	Arst3g00495	922	Pfam	Protein tyrosine and serine/threonine kinase	520	784	IPR001245	GO:0004672\|GO:0006468
	Arst3g00495	922	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	637	649	IPR008271	GO:0004672\|GO:0006468
	Arst3g00495	922	SUPERFAMILY	RCC1/BLIP-II	34	295	IPR009091	-
	Arst3g00495	922	SUPERFAMILY	RCC1/BLIP-II	255	344	IPR009091	-
	Arst3g00495	922	SUPERFAMILY	Protein kinase-like (PK-like)	494	785	IPR011009	-
	Arst3g00495	922	ProSitePatterns	Protein kinases ATP-binding region signature.	523	545	IPR017441	GO:0005524
	Arst3g00495	922	Gene3D	Transferase(Phosphotransferase) domain 1	595	792	-	-
	Arst3g00495	922	SMART	serkin_6	517	790	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g00495	Arst-Chr3	3451559	3455749	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g00495	18	922	Receptor kinase-like Gene Family	AT3G59420	66.304	0.0	1208

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Arst3g00495		PK_Tyr_Ser-Thr	6.9e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g00495	-		-	gmx:100797455	1451.8