Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00487 ATGTATCCGAAACAGTCTGGCCAAGATGGCTCTGTTTCTGGTCCTGTGCGAACTAGTGATAGGATCAGGACAAGACCAAACATTTATGGCCGACCATTCATGTATTACAACACAAATCTTAGGCGGCGGAAGAAAAGCAAGAATAAGTCTAGGACAGCAGCTTCGATTGCCAAGATGCTGCGTCCAGGGAGCCGGAAGGCACAGGATTCAAATGCCAATTCTGGCTCTAGTAACCTTCGACGTTCAACTAGAAAGAGAAGGCTTAATGTAAATCTCGAAGGCTTTGCAACAGACAGCTCTGGAGCTGAGGATGAAGACTTAATGAGGCCTACGTATCGACCACCATTGAGAAATCGGATCAATAATAGCATCAACCAGGAAGAGTTGATGTCTAAGCACAAAAGAGCAGTGTCTACTAAATCAGCACCTAGACGTGAAGGTCTACGGCCTCGTCGTTCTAAGGCTGTGGCAAGAGAACAAGTAATTTCAGAATCAGATGATGGGCAAGACTTTTCAGAAGGCAAGGCAGAACAGGGTGAAACAGAAAATGGAAATGGTGAGGAAAATGATGCAGATGATGGTCAGAATGATATTGAAGGAGATGCTGAGGTGGAAGACGAAGGTGAGGATGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTAGAAATCGTTCTGATGTCCGTAGGTTTTCTATGGAAGAGGGGAAGACCCAACCAAGATCTCCTCGAAGAGTGTTACATCAAGGTATGGGAAATAAGGTTAGCAGGGATGTCAGGAAGGGTGGATCACGAGTTCATAAACGGCATCGCCTAGCAAGGGCTGAAGACTCTGATGACTCCCTTCTTGTGGATGAGCTGGACCAAGGGCCTGCCATTCCATGGGGTCGAGGTGGCAACAGATCTGGGCCCCCCTGGCTCTTTGGGGGCTTAGATACGCATGGAACAACAGCATGGGGATTAAACCTTGCTGCATCGGGTTGGGCCCATCAGAGTGATGCTTTGGCTACCTTGACAACTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAGCCCTTACAGGTGGATGATACTGTTAGTTTTGAGGATATAGGTGGGCTCTCTGAATACATTGATGCTCTTAAAGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTCTTTGCTAGTTACCATATTACTCCTCCTAGAGGGGTGTTGCTATGTGGTCCCCCGGGAACTGGGAAAACATTAATTGCAAGAGCATTGGCTTGTGCTGCTTCAAAAGCCGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCGGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAGAGACAATTGAAGCTACTCTTTGAAGAAGCACAAAGGAATCAACCTTCTATCATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAATAGGATTGACGCTATTGATGGAGCTTTACGGCGCCCTGGTAGATTTGATCGTGAATTTAATTTTCCTTTGCCTGGTTGTGAGGCACGTGCCGAAATATTAGATATTCATACTCGCAAGTGGAAGCATCCACCTTCAAAGGATCTGAAAAGGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGATCTAAAGGCTCTATGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATACCCACAGGTTTATACAAGTGATGACAAATTTCTTATAGACGTGGATTCGGTCAAGGTAGAAAAGTATCATTTTGTTGATGCAATGTCTACAATTACCCCTGCTGCTCACAGGGGAGCTATAGTGCACTCTAGGCCATTATCTCTTGTAGTTCAACCGTGTCTTCAGAGACATCTAGAAAGGGTCATGAGTATTATATCTGATATTTTCCCCCCAGTTTCTGTTGCATCAGAACTGACTAAATTTTCAATGCTTTCCTATGGGTCTGCAATTCCACTTGTTTATCGACCTAGACTCCTACTTTGTGGTGGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTACATTCATTAGGACTTCCATCTCTGCTGTCAGATCCTAGTGCTAAGACACCAGAGGAGGCATTGGTACACATATTTGGCGAAGCTAGAAGAACCACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAAACTGCTCATGAACAACTCAGAGCTGTTCTCCTGACTTTGCTAGATGAATTGCCATCTGACATGCCTATCCTTCTACTGGGAACATCCTCAGTTGTGCTTGCTGAAGTTGAAGATGTACCACATTCAGTTTTCCCTCATCGCTCAGTCTATGAAGTGAACATGCCATCTACTGAGGATAGGACCCTGTTTTTCAATCGTTTAATTGAAGCTGCTATGTCAGTCTTGTTAGAAAGAATGAGTGAGAAATCCGATAATAAAGGACACCTTCCTGAACTTCCCAAGGCACCAAAGTTGGCCACTGGTCCTAAGGTATCTGAGCTAAAAGCAAAGGTAGAAGCTGAGCAACATGCACTTCGCAGATTGCGAATGTGCCTAAGAGATGTTTGCAATCGGATATTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTCTCTGATGAAGACGCACCTAATTATCGAATAGATATGGCAACTTTGCTGCATTATGTTGATAATGGCCATTATATCACATGTGCAGCATTCATGCAGGATATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGTGCTAGAATTGTCAGCAGAGCCTGTGAGCTGCGTGATGCGGTGCAAGGGATGATCTCACAGATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTAGCCAAGGAGGTCCAGCCCAGTTGCCTGATGAATTAGGGGTATCCACTTTCCCTGCAACTCCTGTTGTACAGCTGAGTGCTGCTACTAGAACAAGTGCTCGACTTCGTCATGTCCAACCGGAGGTTAATGTGGATCAGAGTTATGAAGCACTGAAGCGGACAAAGAAGACAGTTGATATTGCACATCCAGTGGCGGAGGAGAAGTCTCCAGAAGATTCTTTACCATCTAAGCCTCCCCCGGAGCATCAGACAAATGAAATGGATTCTGAAATGGTAGAACCTGTGACGATCGATGGAAATTCACATGGAACTTCTACGAGTAGCCAAGATGATGGTGGCAGAAATCTTGAGGATGTCACAATGGTGGATGGTGAATTTTCAGGAAAAGTGGAGTCTTTAAAGGAACAATTTGTTAAGCGCAGTGACAATTGCAGCGTTCCACAACTTGAAAGGCTTTACACAAGGATTATGAAGGGTGTGTTTGAAAGCAGAGATAAAGGTGATGATGTTAAGGCTTCGGTTTTGAAGTTTTTGTCGAAATTTGTAGAGGATGATGCAAATTTCTGA 3618 0.445 MYPKQSGQDGSVSGPVRTSDRIRTRPNIYGRPFMYYNTNLRRRKKSKNKSRTAASIAKMLRPGSRKAQDSNANSGSSNLRRSTRKRRLNVNLEGFATDSSGAEDEDLMRPTYRPPLRNRINNSINQEELMSKHKRAVSTKSAPRREGLRPRRSKAVAREQVISESDDGQDFSEGKAEQGETENGNGEENDADDGQNDIEGDAEVEDEGEDDEDGDDEEGEEEEEEEEEEEEEEEEQDGRRRYDLRNRSDVRRFSMEEGKTQPRSPRRVLHQGMGNKVSRDVRKGGSRVHKRHRLARAEDSDDSLLVDELDQGPAIPWGRGGNRSGPPWLFGGLDTHGTTAWGLNLAASGWAHQSDALATLTTGIQTAGPSSKGGADIQPLQVDDTVSFEDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKDLKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVKVEKYHFVDAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLERVMSIISDIFPPVSVASELTKFSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLDELPSDMPILLLGTSSVVLAEVEDVPHSVFPHRSVYEVNMPSTEDRTLFFNRLIEAAMSVLLERMSEKSDNKGHLPELPKAPKLATGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRIDMATLLHYVDNGHYITCAAFMQDIDLIVSNAKAYNGEDYNGARIVSRACELRDAVQGMISQMDPALVAYCDKIASQGGPAQLPDELGVSTFPATPVVQLSAATRTSARLRHVQPEVNVDQSYEALKRTKKTVDIAHPVAEEKSPEDSLPSKPPPEHQTNEMDSEMVEPVTIDGNSHGTSTSSQDDGGRNLEDVTMVDGEFSGKVESLKEQFVKRSDNCSVPQLERLYTRIMKGVFESRDKGDDVKASVLKFLSKFVEDDANF 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00487 1205 Pfam ATPase family associated with various cellular activities (AAA) 426 561 IPR003959 GO:0005524|GO:0016887
Arst3g00487 1205 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g00487 1205 MobiDBLite consensus disorder prediction 1115 1131 - -
Arst3g00487 1205 PANTHER AAA DOMAIN-CONTAINING 50 1118 IPR045199 -
Arst3g00487 1205 PANTHER AAA DOMAIN-CONTAINING 50 1118 IPR045199 -
Arst3g00487 1205 SUPERFAMILY Bromodomain 904 1012 IPR036427 GO:0005515
Arst3g00487 1205 Pfam Bromodomain 920 981 IPR001487 GO:0005515
Arst3g00487 1205 FunFam ATPase family AAA domain-containing protein 898 1020 - -
Arst3g00487 1205 Coils Coil 214 241 - -
Arst3g00487 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 650 IPR027417 -
Arst3g00487 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 710 923 IPR027417 -
Arst3g00487 1205 FunFam ATPase family, AAA domain-containing 2 384 567 - -
Arst3g00487 1205 Gene3D - 695 855 IPR027417 -
Arst3g00487 1205 SMART bromo_6 906 1007 IPR001487 GO:0005515
Arst3g00487 1205 MobiDBLite consensus disorder prediction 128 182 - -
Arst3g00487 1205 FunFam ATPase family AAA domain-containing protein 2B 562 647 - -
Arst3g00487 1205 MobiDBLite consensus disorder prediction 1 244 - -
Arst3g00487 1205 Pfam AAA+ lid domain 589 625 IPR041569 -
Arst3g00487 1205 Gene3D - 562 647 - -
Arst3g00487 1205 Gene3D - 898 1020 IPR036427 GO:0005515
Arst3g00487 1205 MobiDBLite consensus disorder prediction 277 296 - -
Arst3g00487 1205 Gene3D - 384 654 IPR027417 -
Arst3g00487 1205 MobiDBLite consensus disorder prediction 1081 1134 - -
Arst3g00487 1205 SMART AAA_5 422 563 IPR003593 GO:0016887
Arst3g00487 1205 ProSitePatterns AAA-protein family signature. 531 549 IPR003960 GO:0005524|GO:0016887
Arst3g00487 1205 MobiDBLite consensus disorder prediction 183 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00487 Arst-Chr3 3392423 3399364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00487 372 626 Calmodulin-binding Proteins AT3G56690 36.680 2.21e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00487 K22531 - gmx:100787765 1915.58