Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00484 ATGAGGCCTACGTATCGACCACCATTGAGAAATCGGATCAATAATAGCATCAACCAGGAAGAGTTGATGTCTAAGCACAAAAGAGCAGTGTCTACTAAATCAGCACCTAGACGTGAAGGTCTACGGCCTCGTCGTTCTAAGGCTGTGGCAAGAGAACAAGTAATTTCAGAATCAGATGATGGGCAAGACTTTTCAGAAGGCAAGGCAGAACAGGGTGAAACAGAAAATGGAAATGGTGAGGAAAATGATGCAGATGATGGTCAGAATGATATTGAAGGAGATGCTGAGGTGGAAGACGAAGGTGAGGATGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTAGAAATCGTTCTGATGTCCGTAGGTTTTCTATGGAAGAGGGGAAGACCCAACCAAGATCTCCTCGAAGAGTGTTACATCAAGGTATGGGAAATAAGGTTAGCAGGGATGTCAGGAAGGGTGGATCACGAGTTCATAAACGGCATCGCCTAGCAAGGGCTGAAGACTCTGATGACTCCCTTCTTGTGGATGAGCTGGACCAAGGGCCTGCCATTCCATGGGGTCGAGGTGGCAACAGATCTGGGCCCCCCTGGCTCTTTGGGGGCTTAGATACGCATGGAACAACAGCATGGGGATTAAACCTTGCTGCATCGGGTTGGGCCCATCAGAGTGATGCTTTGGCTACCTTGACAACTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAGCCCTTACAGGTGGATGATACTGTTAGTTTTGAGGATATAGGTGGGCTCTCTGAATACATTGATGCTCTTAAAGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTCTTTGCTAGTTACCATATTACTCCTCCTAGAGGGGTGTTGCTATGTGGTCCCCCGGGAACTGGGAAAACATTAATTGCAAGAGCATTGGCTTGTGCTGCTTCAAAAGCCGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCGGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAGAGACAATTGAAGCTACTCTTTGAAGAAGCACAAAGGAATCAACCTTCTATCATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAATAGGATTGACGCTATTGATGGAGCTTTACGGCGCCCTGGTAGATTTGATCGTGAATTTAATTTTCCTTTGCCTGGTTGTGAGGCACGTGCCGAAATATTAGATATTCATACTCGCAAGTGGAAGCATCCACCTTCAAAGGATCTGAAAAGGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGATCTAAAGGCTCTATGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATACCCACAGGTTTATACAAGTGATGACAAATTTCTTATAGACGTGGATTCGGTCAAGGTAGAAAAGTATCATTTTGTTGATGCAATGTCTACAATTACCCCTGCTGCTCACAGGGGAGCTATAGTGCACTCTAGGCCATTATCTCTTGTAGTTCAACCGTGTCTTCAGAGACATCTAGAAAGGGTCATGAGTATTATATCTGATATTTTCCCCCCAGTTTCTGTTGCATCAGAACTGACTAAATTTTCAATGCTTTCCTATGGGTCTGCAATTCCACTTGTTTATCGACCTAGACTCCTACTTTGTGGTGGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTACATTCATTAGGACTTCCATCTCTGCTGTCAGATCCTAGTGCTAAGACACCAGAGGAGGCATTGGTACACATATTTGGCGAAGCTAGAAGAACCACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAAACTGCTCATGAACAACTCAGAGCTGTTCTCCTGACTTTGCTAGATGAATTGCCATCTGACATGCCTATCCTTCTACTGGGAACATCCTCAGTTGTGCTTGCTGAAGTTGAAGATGTACCACATTCAGTTTTCCCTCATCGCTCAGTCTATGAAGTGAACATGCCATCTACTGAGGATAGGACCCTGTTTTTCAATCGTTTAATTGAAGCTGCTATGTCAGTCTTGTTAGAAAGAATGAGTGAGAAATCCGATAATAAAGGACACCTTCCTGAACTTCCCAAGGCACCAAAGTTGGCCACTGGTCCTAAGGTATCTGAGCTAAAAGCAAAGGTAGAAGCTGAGCAACATGCACTTCGCAGATTGCGAATGTGCCTAAGAGATGTTTGCAATCGGATATTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTCTCTGATGAAGACGCACCTAATTATCGAATAGATATGGCAACTTTGCTGCATTATGTTGATAATGGCCATTATATCACATGTGCAGCATTCATGCAGGATATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGTGCTAGAATTGTCAGCAGAGCCTGTGAGCTGCGTGATGCGGTGCAAGGGATGATCTCACAGATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTAGCCAAGGAGGTCCAGCCCAGTTGCCTGATGAATTAGGGGTATCCACTTTCCCTGCAACTCCTGTTGTACAGCTGAGTGCTGCTACTAGAACAAGTGCTCGACTTCGTCATGTCCAACCGGAGGTTAATGTGGATCAGAGTTATGAAGCACTGAAGCGGACAAAGAAGACAGTTGATATTGCACATCCAGTGGCGGAGGAGAAGTCTCCAGAAGATTCTTTACCATCTAAGCCTCCCCCGGAGCATCAGACAAATGAAATGGATTCTGAAATGGTAGAACCTGTGACGATCGATGGAAATTCACATGGAACTTCTACGAGTAGCCAAGATGATGGTGGCAGAAATCTTGAGGATGTCACAATGGTGGATGGTGAATTTTCAGGAAAAGTGGAGTCTTTAAAGGAACAATTTGTTAAGCGCAGTGACAATTGCAGCGTTCCACAACTTGAAAGGCTTTACACAAGGATTATGAAGGGTGTGTTTGAAAGCAGAGATAAAGGTGATGATGTTAAGGCTTCGGTTTTGAAGTTTTTGTCGAAATTTGTAGAGGATGATGCAAATTTCTGA 3297 0.4431 MRPTYRPPLRNRINNSINQEELMSKHKRAVSTKSAPRREGLRPRRSKAVAREQVISESDDGQDFSEGKAEQGETENGNGEENDADDGQNDIEGDAEVEDEGEDDEDGDDEEGEEEEEEEEEEEEEEEEQDGRRRYDLRNRSDVRRFSMEEGKTQPRSPRRVLHQGMGNKVSRDVRKGGSRVHKRHRLARAEDSDDSLLVDELDQGPAIPWGRGGNRSGPPWLFGGLDTHGTTAWGLNLAASGWAHQSDALATLTTGIQTAGPSSKGGADIQPLQVDDTVSFEDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKDLKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVKVEKYHFVDAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLERVMSIISDIFPPVSVASELTKFSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLDELPSDMPILLLGTSSVVLAEVEDVPHSVFPHRSVYEVNMPSTEDRTLFFNRLIEAAMSVLLERMSEKSDNKGHLPELPKAPKLATGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRIDMATLLHYVDNGHYITCAAFMQDIDLIVSNAKAYNGEDYNGARIVSRACELRDAVQGMISQMDPALVAYCDKIASQGGPAQLPDELGVSTFPATPVVQLSAATRTSARLRHVQPEVNVDQSYEALKRTKKTVDIAHPVAEEKSPEDSLPSKPPPEHQTNEMDSEMVEPVTIDGNSHGTSTSSQDDGGRNLEDVTMVDGEFSGKVESLKEQFVKRSDNCSVPQLERLYTRIMKGVFESRDKGDDVKASVLKFLSKFVEDDANF 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00484 1098 PANTHER AAA DOMAIN-CONTAINING 987 1078 IPR045199 -
Arst3g00484 1098 PANTHER AAA DOMAIN-CONTAINING 987 1078 IPR045199 -
Arst3g00484 1098 Pfam ATPase family associated with various cellular activities (AAA) 319 454 IPR003959 GO:0005524|GO:0016887
Arst3g00484 1098 Pfam Bromodomain 813 874 IPR001487 GO:0005515
Arst3g00484 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 816 IPR027417 -
Arst3g00484 1098 MobiDBLite consensus disorder prediction 1 137 - -
Arst3g00484 1098 FunFam ATPase family, AAA domain-containing 2 277 460 - -
Arst3g00484 1098 MobiDBLite consensus disorder prediction 1008 1024 - -
Arst3g00484 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 543 IPR027417 -
Arst3g00484 1098 Pfam AAA+ lid domain 482 518 IPR041569 -
Arst3g00484 1098 Gene3D - 455 540 - -
Arst3g00484 1098 MobiDBLite consensus disorder prediction 21 75 - -
Arst3g00484 1098 SMART bromo_6 799 900 IPR001487 GO:0005515
Arst3g00484 1098 Gene3D - 791 913 IPR036427 GO:0005515
Arst3g00484 1098 Gene3D - 588 749 IPR027417 -
Arst3g00484 1098 MobiDBLite consensus disorder prediction 170 189 - -
Arst3g00484 1098 MobiDBLite consensus disorder prediction 974 1027 - -
Arst3g00484 1098 FunFam ATPase family AAA domain-containing protein 791 913 - -
Arst3g00484 1098 Coils Coil 107 134 - -
Arst3g00484 1098 ProSitePatterns AAA-protein family signature. 424 442 IPR003960 GO:0005524|GO:0016887
Arst3g00484 1098 SMART AAA_5 315 456 IPR003593 GO:0016887
Arst3g00484 1098 Gene3D - 277 547 IPR027417 -
Arst3g00484 1098 FunFam ATPase family AAA domain-containing protein 2B 455 540 - -
Arst3g00484 1098 MobiDBLite consensus disorder prediction 76 129 - -
Arst3g00484 1098 SUPERFAMILY Bromodomain 797 905 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00484 Arst-Chr3 3392423 3399364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00484 265 519 Calmodulin-binding Proteins AT3G56690 36.680 1.74e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00484 K22531 - gmx:100787765 1758.42