Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00478 ATGAGGCACTTGCCGAAGCACCCTAACATTGTGTCGTTCAGAGAGGCTTATGAAGATAAAGATGCCGTGTACCTTGTCATGGAGTTGTGCCAAGGCGGCGAGCTTTTCGATCGTATTGTCGCCAAAGGCCATTACACCGAGCGCGCTGCTGCTAATGTTACCAAGACCATACTTGAAGTCTGCAAGGTGTGCCATGAACATGGCGTAATCCACAGGGACTTGAAACCTGAAAATTTCTTGTTTGCAGATGCAAGTGAGAGCTCCCAATTGAAGGCTATTGATTTTGGCCTTTCCACATTTTATACACCTGGCCAAAGATTTAATGAAATCGTTGGAAGTCCCTATTACATGGCTCCAGAGGTTCTAAGACGTAACTATGGAAATGAAGTTGATATATGGAGCACTGGCGTCATTCTCTATATTTTGCTTTGTGGAGTTCCTCCCTTTTGGGCAGAAACTGAGGAAGGAATTGCACAAGCAATCATCAGGGGTCATTTGGACTTCACAAGAGATCCTTGGCCTAAAGTTTCAGATGAAGCAAAACACCTTGTTAAGCGTATGCTTGATCCAAATCCACAAACCAGGATAACAGTTCAAGAAGTCCTTGACCATTCTTGGATACTACATAGGGAGCATGGTAGAAATGTTTCCCTTGGAGACCAAGTGAGAAATAGGATCAAGCAATTCTCCTTAATGAATAGATTCAAGAAGAAGGTTCTTAGAGTGGTGGCTGATAACCTTCCTGATGAGCAACTTGATAGCATGACCAAAATGTTCCATATGATGGACAAGGACAAGAATGGAGACTTGTCATTTGAGGAGCTCAAAGACGGCCTTGCACTGTTTGGACACACACTTCCTGATCTTGATGTCAAGATGCTGATGGATGCTGTAAATGTTGATGGAAATGGCACCTTGAACCGTGAGGAATTTATCACAATGAGTGTTTTCCTAAGGAGGATTGGAAGTGAAGAGACTCTGACAGATGCATTCCGTGACTTTGACAAGAATCAAACCGGATTCATCGAGTTTGACGAATTGAAAGAGGCTTTATCAGCTGATGATGAACACACTGATGAGCAGGTGATCACAGACATCCTCAATGATGTTGACTTAGACAAGGATGGCCGAATCAGTTTCGATGAGTTCAAGGCAATGATGAAGTCAGGAGCAGATTGGAAGATGTCGTCTCGCCAGTATTCAAGAGCAATGCTAAACGCATTGAGTTTCAGGCTCTTCAAAGACAAATCTGTGAAGGTAACCAATTAA 1269 0.4326 MRHLPKHPNIVSFREAYEDKDAVYLVMELCQGGELFDRIVAKGHYTERAAANVTKTILEVCKVCHEHGVIHRDLKPENFLFADASESSQLKAIDFGLSTFYTPGQRFNEIVGSPYYMAPEVLRRNYGNEVDIWSTGVILYILLCGVPPFWAETEEGIAQAIIRGHLDFTRDPWPKVSDEAKHLVKRMLDPNPQTRITVQEVLDHSWILHREHGRNVSLGDQVRNRIKQFSLMNRFKKKVLRVVADNLPDEQLDSMTKMFHMMDKDKNGDLSFEELKDGLALFGHTLPDLDVKMLMDAVNVDGNGTLNREEFITMSVFLRRIGSEETLTDAFRDFDKNQTGFIEFDELKEALSADDEHTDEQVITDILNDVDLDKDGRISFDEFKAMMKSGADWKMSSRQYSRAMLNALSFRLFKDKSVKVTN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00478 422 CDD STKc_CAMK 1 206 - -
Arst3g00478 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Arst3g00478 422 Pfam EF-hand domain pair 267 315 IPR002048 GO:0005509
Arst3g00478 422 SUPERFAMILY Protein kinase-like (PK-like) 1 210 IPR011009 -
Arst3g00478 422 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00478 422 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Arst3g00478 422 Gene3D - 216 390 - -
Arst3g00478 422 FunFam Calcium-dependent protein kinase 7 216 391 - -
Arst3g00478 422 CDD EFh 327 388 IPR002048 GO:0005509
Arst3g00478 422 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Arst3g00478 422 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 380 - -
Arst3g00478 422 Pfam Protein kinase domain 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00478 422 Pfam EF-hand domain pair 325 388 IPR002048 GO:0005509
Arst3g00478 422 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Arst3g00478 422 SMART efh_1 362 390 IPR002048 GO:0005509
Arst3g00478 422 SMART efh_1 290 318 IPR002048 GO:0005509
Arst3g00478 422 SMART efh_1 326 354 IPR002048 GO:0005509
Arst3g00478 422 SMART efh_1 254 282 IPR002048 GO:0005509
Arst3g00478 422 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Arst3g00478 422 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Arst3g00478 422 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Arst3g00478 422 FunFam calcium-dependent protein kinase 13 35 215 - -
Arst3g00478 422 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Arst3g00478 422 SUPERFAMILY EF-hand 235 394 IPR011992 -
Arst3g00478 422 Gene3D Transferase(Phosphotransferase) domain 1 35 215 - -
Arst3g00478 422 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00478 Arst-Chr3 3370943 3374153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00478 1 415 EF-hand Containing Proteins AT2G31500 71.531 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst3g00478 Pkinase 3.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00478 K13412 - gmx:100818929 711.064