Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00465 ATGTCGTCAACCACCACCCCTCACGGTGGAGATTTCGACACGCCGACACTGGACATGGAGTCAGCGGAGCTCCTCCAAACCATATCGGAGCACGGCGGCTACGCCTACGTGAGAATGGCATCGCTGGCGGCGACCGGTGACGTCCGGGCCGCGGAGGCGGCGCTGGAGATGGCGTGGGAGCAGCTGCACTCAGGTCCGTGGCAGTCGGTGCTTCCGGTGTGGCGCGACGCGTACTCGATGGCATGCCTCCACGTGGCAAGGCACCACAACGGTAACGGCGAGTTCAAGGAGGCGCTTAGGGTTCTTGACATGGGGATCATCATGGGAGGGACGCTCCTCAGAAAGGATTTGGACTCTGCGATAGAGAAGGTTTCAGAGAGAGCCAACAGTTCCCGTAGGGTTTCTGAGGGAAGCTTCGAAGAAGGTTCGGTCAACAACTCCGAGCAACGAAGCCTTGTTCATCCGGAATTTCATGTGTCTCAGGTGCTCCAACTTTTACCTATCAAGTCCCTTTCTTCTAAGATTGTGGAAAAGAGATCTGGTTTGTCGCTGGACAAGTTCTTGAAAGATCATTACCTGGCTGGTACACCGGTTATCATCAGTGATTGTATGGTTCACTGGCCGGCCAAGACAAAATGGAACAACATAGACTATTTGCTGAGAGTTGCTGGTGATCGTACAATTCCCGTCGAGGTTGGCAAGAACTATTTATGTACAGACTGGAAGCAAGAGCTAATCACATTTTCAGAGTTGCTTCAGCGTATAAAATCCAATGGTGGTTCTCCAGGGGGTCCTACATATCTTGCCCAGCATCCATTATTTGATCAAATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTGCCGGTGGAGGGGAGCTAAGATCTCTTAATGCTTGGTTTGGTCCAGCTGGAACAGTAACGCCATTACACCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGGAAGAAGTACGTTAGGCTTTACTCAGCATCTTTGTCTGAGGAACTTTATCCCTACTCGGAGACAATGCGTACCAATTCCAGCCAGGTTGACTTAGATGACATAGATGAAAGGAAGTTTCCTAAAGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGATATGTTATATATCCCACCAAAGTGGTGGCACTATGTGCGGTCCCTAACTACAAGTTTCTCAGTTAGCTTCTGGTGGAGTGAGGGTGAATGTTCAGATGCACCCTAA 1254 0.4928 MSSTTTPHGGDFDTPTLDMESAELLQTISEHGGYAYVRMASLAATGDVRAAEAALEMAWEQLHSGPWQSVLPVWRDAYSMACLHVARHHNGNGEFKEALRVLDMGIIMGGTLLRKDLDSAIEKVSERANSSRRVSEGSFEEGSVNNSEQRSLVHPEFHVSQVLQLLPIKSLSSKIVEKRSGLSLDKFLKDHYLAGTPVIISDCMVHWPAKTKWNNIDYLLRVAGDRTIPVEVGKNYLCTDWKQELITFSELLQRIKSNGGSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASLSEELYPYSETMRTNSSQVDLDDIDERKFPKVQDLEFVDCILEEGDMLYIPPKWWHYVRSLTTSFSVSFWWSEGECSDAP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00465 417 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 76 410 - -
Arst3g00465 417 ProSiteProfiles JmjC domain profile. 275 417 IPR003347 -
Arst3g00465 417 SMART cupin_9 266 416 IPR003347 -
Arst3g00465 417 FunFam lysine-specific demethylase JMJ30 175 408 - -
Arst3g00465 417 Pfam Cupin-like domain 186 409 IPR041667 -
Arst3g00465 417 Gene3D Cupin 174 409 - -
Arst3g00465 417 SUPERFAMILY Clavaminate synthase-like 176 409 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00465 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 24.579 2.98e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst3g00465 Cupin_8 8.2e-48 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00465 K24444 - gmx:100813075 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00465 3 3230483 3234322 Arst3g00465 3 3230483 3234322 ECH