Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00446 ATGAACTCATCTTCAAACAATAATAACTGGCTTTCGTTCCCTCTTTCACCAACTCATCATCAAGCCACTACTCAATATCATCAATTCCCTCTTGGCTTTGTCAACGACACCATCGAAAATCCTTTCCACAATCATGATTGGAATAATGTGATAAATGGTGGTGAGAGCAGCAATAAGAATGATGAAGTTCCAAAGGTAGCGGATTTCCTTGGTGTGAGGAAGGCAGAGGAAGATTCATCATCATCAGATCTTGTTGCCCTCACTACACACCTCTTCACCGGTAACAGTGTCTTGCCGTTGCAGCAAAACAACAACTATGAGGTGGAGGAGCAGCAGTTTCAAACAAATAATAATCTGCAAGCACTCACATTGTCCATGGGAAGTGGTAGTAATAATAATAATAATAATAATAATAATAAGGATTCATCAACAACCAGCTGTGACAATAACAACATTATTGAAGCCCCACCTTCTAATAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACTGTGGCGTAACAAGACATAGATGGACCGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGCAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTGTATTTAGGTGGATATGATAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCATTGAAGTATTGGGGGACATCCACTACTACCAACTTTCCTATCAGCAACTATGAGAAGGAATTGGATGATATGAAACACATGACAAGGCAAGAATTTGTAGCCGCCATAAGAAGGAAAAGTAGTGGTTTCTCGAGAGGTGCATCAATGTATCGTGGAGTCACAAGGCATCACCAACATGGGAGATGGCAAGCAAGAATTGGAAGGGTAGCCGGAAACAAAGATCTTTACTTAGGAACATTTAGTACGGAAGAAGAGGCTGCAGAAGCTTATGACATAGCAGCCATAAAGTTCAGAGGCCTTAACGCCGTTACGAACTTCGACATGAGCCGTTACGACGTCAAAGCCATTCTTGAAAGCAACGCTCTCCCAATTGGAGGTGGTGCTGCTAAGAGATTGAAAGAAGCACAAGCTTTGGAATCTTCTAGAAAACGAGAACAGTTGCTTGCACTCGGAGCTGGTGCCTCTTCTTCTTCTTCTACTAGGTTCCCTTTCATGCAGCAGCACCACCAGTTCAATCAAGAGCTTCAGATTCAACCATTGTTAAACCTACAGAACCACGAGGTTTCTCATTATCAATTCATGCAGCAGGATCTTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCATCGTTGCTTCATCACAGTTATCTGCAAACGCAGATTCAGTTACACCAACAGAATGCTCAGTTTTACAACAGTTACCTTCATGGAATGATCAACATTGGTTCTTCTCCTTCTTCTTTTTCGCTCATGGATAACAATAATAATAATAATAATAATAACATGCTTGGTTTGGCTTCCAATAATTCTTCTTCCGAGGAACTTGCGTTGGTTAAGGTTGACTATGATATGAATCCTGGCGGTTATGGCGGTTGGCCAGGAACCACGGAGACAGCGTCGGAGTCTATGCAGGAACAAAGTGGCGGTGTTTTTACAATGTGGAATGATTAG 1629 0.418 MNSSSNNNNWLSFPLSPTHHQATTQYHQFPLGFVNDTIENPFHNHDWNNVINGGESSNKNDEVPKVADFLGVRKAEEDSSSSDLVALTTHLFTGNSVLPLQQNNNYEVEEQQFQTNNNLQALTLSMGSGSNNNNNNNNNKDSSTTSCDNNNIIEAPPSNRRTLDTFGQRTSIYCGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKELDDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNALPIGGGAAKRLKEAQALESSRKREQLLALGAGASSSSSTRFPFMQQHHQFNQELQIQPLLNLQNHEVSHYQFMQQDLSSSSSSPSPSPSSLLHHSYLQTQIQLHQQNAQFYNSYLHGMINIGSSPSSFSLMDNNNNNNNNNMLGLASNNSSSEELALVKVDYDMNPGGYGGWPGTTETASESMQEQSGGVFTMWND 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00446 542 ProSiteProfiles AP2/ERF domain profile. 274 332 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 Pfam AP2 domain 173 230 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 Pfam AP2 domain 275 324 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 MobiDBLite consensus disorder prediction 419 438 - -
Arst3g00446 542 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 68 425 - -
Arst3g00446 542 FunFam AP2-like ethylene-responsive transcription factor 273 334 - -
Arst3g00446 542 MobiDBLite consensus disorder prediction 523 542 - -
Arst3g00446 542 Gene3D AP2/ERF domain 274 334 IPR036955 GO:0003700|GO:0006355
Arst3g00446 542 Gene3D AP2/ERF domain 172 240 IPR036955 GO:0003700|GO:0006355
Arst3g00446 542 MobiDBLite consensus disorder prediction 125 156 - -
Arst3g00446 542 CDD AP2 273 334 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 ProSiteProfiles AP2/ERF domain profile. 172 238 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 SMART rav1_2 172 244 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 SMART rav1_2 274 338 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 SUPERFAMILY DNA-binding domain 273 334 IPR016177 GO:0003677
Arst3g00446 542 CDD AP2 171 240 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 PRINTS Ethylene responsive element binding protein signature 314 334 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Arst3g00446 542 SUPERFAMILY DNA-binding domain 171 240 IPR016177 GO:0003677
Arst3g00446 542 FunFam AP2-like ethylene-responsive transcription factor ANT 171 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00446 Arst-Chr3 3094915 3097584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00446 6 542 AP2-EREBP Transcription Factor Family AT3G20840 56.040 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst3g00446 AP2 7.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00446 K09285 - gmx:100788471 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00446 3 3094915 3097584 Arst3g00446 3 3094915 3097584 ECH