Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00441 ATGGTCATGGCAGATTCAACCTACAGCAACTCCAATAATGAGTATAATACTAACAACCTCCTTCTCTTGGATCTCAATTATTCTCCTTCTCCTTCTCCATCTTCTTCTCCTTCTACCACCAATTCCTTCAATTACTTTCATCCTCCACCAATCACAACAACACATCAACATCAACAACAACTAGATCTTCAATCTTCATTTTCTGCCATGGAAGTTCAAAACAACAATAACAATAAGGTGCCTCTACACTTAGGGCTTCAAAGCACGGTAGTAGTACAAGATTCTTCAGTATTAGAAGAAGATGAAGAAGAAGAAAAAATCACTGTTGCTTCTGAATATGTTATGTCAAATGGAATTAACAGAGGACAGTATTGGATCCCAACACCTACTCAGATCCTCATCGGTCCTACACAGTTCGCATGCCCCCTTTGCTTCAAAACCTTCAACAGATACAATAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGTCCAGAATCTCTAAGGGGAACACAACCAACAGCAATGTTGAAACTGCCATGTTATTGCTGTGCAGCAGGATGCAAGAACAACATAGACCACCCTAGAGCAAAACCACTCAAAGATTTCAGAACCCTTCAAACTCATTACAAGAGAAAGCATGGACTTAAACCCTTCACTTGTAGGAAGTGTTCCAAGGCATTTGCTGTGAGAGGTGATTGGAGGACTCATGAGAAGAATTGTGGGAAGCGATGGTATTGCTCTTGTGGCTCTGATTTTAAGCACAAGAGATCCCTTAAGGATCATATCAAGGCATTTGGAAATGGACACAAATCTTATGCAATTAATGACCATCTTTGTGTTGATCAAGATGATAATAATGGAGCTGCATCTGAAGTTGAAGAAAATGATTCATTCCACTCCTAG 918 0.4009 MVMADSTYSNSNNEYNTNNLLLLDLNYSPSPSPSSSPSTTNSFNYFHPPPITTTHQHQQQLDLQSSFSAMEVQNNNNNKVPLHLGLQSTVVVQDSSVLEEDEEEEKITVASEYVMSNGINRGQYWIPTPTQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAAGCKNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFTCRKCSKAFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGNGHKSYAINDHLCVDQDDNNGAASEVEENDSFHS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00441 305 Gene3D Classic Zinc Finger 182 272 - -
Arst3g00441 305 SUPERFAMILY beta-beta-alpha zinc fingers 134 161 IPR036236 -
Arst3g00441 305 FunFam Zinc finger protein WIP2 192 274 - -
Arst3g00441 305 PANTHER ZINC FINGER PROTEIN WIP2 26 301 IPR043584 GO:0003700|GO:0010468
Arst3g00441 305 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Arst3g00441 305 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 166 IPR013087 -
Arst3g00441 305 SUPERFAMILY beta-beta-alpha zinc fingers 205 243 IPR036236 -
Arst3g00441 305 SMART c2h2final6 139 161 IPR013087 -
Arst3g00441 305 SMART c2h2final6 223 243 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00441 Arst-Chr3 3061584 3063427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00441 100 304 C2H2 Transcription Factor Family AT3G57670 76.098 6.88e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g00441 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00441 - - gmx:100789416 394.43