Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00426 ATGAGGAAGCCTAGTGAGCAATCATCATCATCGAAAAACAACAAGTTGAGAAAAGGGTTGTGGTCACCGGAGGAAGATGACAAGTTGATGAACTACATGATGAACAATGGACAAGGTTGTTGGAGTGATATTGCTAGGAATGCGGGCCTCCAAAGGTGTGGTAAGAGTTGTCGCCTTCGATGGATCAATTATCTCAGACCTGACCTTAAACGTGGTGCATTCTCTCCCCATGAACAACAACTCATCATCCATTTCCACTCCCTTCTTGGAAACAGATGGTCACAAATAGCTGCGCGTTTACCTGGAAGAACCGACAATGAAATCAAGAACTTTTGGAATTCAACAATCAAGAAAAGACTCAAGCAGCAGCAGCAGCAATCAACTACTTCACCAAATGCAAGCGATGATCATGATTATTCCTCTTATGACCCTAACAACAACAACAAAGACCTCAACATTGTAGGAGGAGGAGAAGGGCTTAATAGTAATTCTACTACACAACAATTTCATCAACACCATCTTCATTTTATGCCACTAGTGTTCAATTCTTCTTCTTCTTCATCATCATCATCAATGCAAAACACAGTTCTCAACACCATAATTGACAGGTTGCCTATGCTAGATCATGGTCTTAACATTCCACCAGCTAATGGATTCAACAACAAAGGCTTTTATGATTTGGAAAATGGTGTGATTGGGGGTGTAGATAATAATAATAATAATATTAATAATCTTGGGGCTGAAGAAGTAGTAGTAGGGGATAATACATATACTAATACTAACACTTTTTCTGACCATGATAATAATAACCTAAAAGTGTTGGAGAGTGCATGCATTAATAACAATACTAATTACTTTGATGACATAAACAACAAGATCATGAAGGGTGGGGTGGTGGAGAATTTGTTTCATGAAGAGTTGACCTTGGGAGAGTGGGACTTGGAAGAATTCATGAAAGATGTTACATCTTTTCCCTTTCTTGCTGATTTTTCAAATTGA 999 0.3854 MRKPSEQSSSSKNNKLRKGLWSPEEDDKLMNYMMNNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPHEQQLIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKQQQQQSTTSPNASDDHDYSSYDPNNNNKDLNIVGGGEGLNSNSTTQQFHQHHLHFMPLVFNSSSSSSSSSMQNTVLNTIIDRLPMLDHGLNIPPANGFNNKGFYDLENGVIGGVDNNNNNINNLGAEEVVVGDNTYTNTNTFSDHDNNNLKVLESACINNNTNYFDDINNKIMKGGVVENLFHEELTLGEWDLEEFMKDVTSFPFLADFSN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00426 332 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Arst3g00426 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Arst3g00426 332 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Arst3g00426 332 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g00426 332 PANTHER MYB DOMAIN PROTEIN 55 10 276 - -
Arst3g00426 332 Pfam Myb-like DNA-binding domain 21 80 - -
Arst3g00426 332 MobiDBLite consensus disorder prediction 118 167 - -
Arst3g00426 332 CDD SANT 21 65 IPR001005 -
Arst3g00426 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Arst3g00426 332 Gene3D - 15 71 - -
Arst3g00426 332 Gene3D - 72 142 - -
Arst3g00426 332 SMART sant 17 67 IPR001005 -
Arst3g00426 332 SMART sant 70 118 IPR001005 -
Arst3g00426 332 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Arst3g00426 332 CDD SANT 73 113 IPR001005 -
Arst3g00426 332 FunFam Myb transcription factor 73 120 - -
Arst3g00426 332 FunFam MYB transcription factor 15 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00426 Arst-Chr3 2977020 2979700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00426 3 330 MYB Transcription Factor Family AT3G08500 45.161 2.82e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g00426 Myb_DNA-bind_6 4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00426 K09422 - gmx:100785810 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01645 8 25108830 25110410 Arst3g00426 3 2977020 2979700 PCT