Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00422 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGTTGGTGGCCTTCACACATCAAATCAAACCTTCACGACTTATCTGATAATGATGACGGGGGCAAGAATGAGAAGGATCAATGGGTTGGATTCAATGAGTACACGTGGGATCAGCTTAAGGTTGCAACTTCAGGTTTCTCACCAGAGAACATTGTGTCAGAACATGGAGAGAAAGCTCCCAATGTTGTTTACAAAGGAAGGCTTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAATCAGCTTGGCCTGATTCAAGACAATTTCTAGAGGAAGCAAGAGCAGTGGGGCAGTTAAGGAATGAAAGATTAGCTAACTTGGTTGGATGCTGCTGTGAAGGAGAAGAGAGGTTGCTTGTTGCAGAGTTCATGCCACATGAAACTCTCTCCAAACATCTCTTCCACTGGGAGACACAGCCCATGAAATGGGCAATGAGGTTGAGGGTGGCATTGTATTTAGCACAAGCATTGGATTACTGCAGCAGTAGAGGAAGAGCATTGTATCATGATCTTAATGCTTATAGAATCTTGTTTGATGAGGATGCCAACCCCAGGCTCTCTTGTTTTGGACTCATGAAAAACAGTAGAGACGGCCGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCGGAGTACTTGAGGACTGGAAGAATCACCCCTGAAAGTGTAGTATACAGTTTTGGCACACTTTTGCTTGATCTTCTGAGTGGAAAGCATATTCCACCCAGTCATGCACTTGACCTTATACGCGGCAAAAATTTTTCCTTGCTGATGGACTCTTGTTTAGAAGGTCATTTTTCGAATGATGATGGAACTGAGATAGTGAGATTGGCTTCGCGTTGTCTACAATATGAACCTCGTGAGAGACCAAATGCAAAGTCACTTGTGACCGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTACTGTCGTATGTTTTGATGGGCATACCAGATGGGAATGTATCATCAAAGGAAACAGTTTCTTTGACACCTTTCGGTGAAGCTTGTTCAAGAAGAGATCTCACTGCTATACATGAAATTTTGGATAAGGTGGGGTACAAGGATGATGAAGATGTTGCAAACGAGCTTTCCTTCCAAATGTGGACAAATCAAATACAGGAAACTCTGAATTCTAAGAAACTTGGAGATACTGCTTTTCGTGCTAGAGACTTCTCTACAGCCATTGACTACTACACACAATTCATTGATGTTGGGACCATGGTATCGCCAACCGTGTATGCCAGGCGTTGCTTATGCTATCTTATGAATGACATGCCACAAGAGGCACTCGGAGATGCTATGCAAGCTCAATCAGTATCTCCCACATGGTCGACGGCGTTCTATCTTCAAGCTGCTGCACTCTTCAGCCTTGGCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGCACAATACTGGAAACCAGGAAGCATAGAAATTGA 1476 0.4377 MGARCSKFSLCWWPSHIKSNLHDLSDNDDGGKNEKDQWVGFNEYTWDQLKVATSGFSPENIVSEHGEKAPNVVYKGRLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPHETLSKHLFHWETQPMKWAMRLRVALYLAQALDYCSSRGRALYHDLNAYRILFDEDANPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSLLMDSCLEGHFSNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVLSYVLMGIPDGNVSSKETVSLTPFGEACSRRDLTAIHEILDKVGYKDDEDVANELSFQMWTNQIQETLNSKKLGDTAFRARDFSTAIDYYTQFIDVGTMVSPTVYARRCLCYLMNDMPQEALGDAMQAQSVSPTWSTAFYLQAAALFSLGMDNDAQESLKDGTILETRKHRN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00422 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Arst3g00422 491 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Arst3g00422 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Arst3g00422 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Arst3g00422 491 SUPERFAMILY Protein kinase-like (PK-like) 37 317 IPR011009 -
Arst3g00422 491 FunFam probable serine/threonine-protein kinase At4g35230 384 491 - -
Arst3g00422 491 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00422 491 Gene3D Tetratricopeptide repeat domain 384 490 IPR011990 GO:0005515
Arst3g00422 491 SUPERFAMILY TPR-like 390 479 IPR011990 GO:0005515
Arst3g00422 491 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Arst3g00422 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 19 490 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00422 Arst-Chr3 2950994 2954573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00422 27 333 Glycoside Hydrolase AT3G07070 32.153 9.15e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Arst3g00422 PK_Tyr_Ser-Thr 2.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00422 - - gmx:732542 900.197